Type: Package
Package: splatter
Title: Simple Simulation of Single-cell RNA Sequencing Data
Version: 1.30.0
Date: 2024-10-17
Authors@R: c(
    person("Luke", "Zappia", , "luke@lazappi.id.au", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0001-7744-8565", GitHub = "lazappi")),
    person("Belinda", "Phipson", , "belinda.phipson@petermac.org", role = "aut",
           comment = c(ORCID = "0000-0002-1711-7454", GitHub = "bphipson")),
    person("Christina", "Azodi", , "cazodi@svi.edu.au", role = "ctb",
           comment = c(ORCID = "0000-0002-6097-606X", GitHub = "azodichr")),
    person("Alicia", "Oshlack", , "alicia.oshlack@petermac.org", role = "aut",
           comment = c(ORCID = "0000-0001-9788-5690"))
  )
Description: Splatter is a package for the simulation of single-cell RNA
    sequencing count data. It provides a simple interface for creating
    complex simulations that are reproducible and well-documented.
    Parameters can be estimated from real data and functions are provided
    for comparing real and simulated datasets.
License: GPL-3 + file LICENSE
URL: https://bioconductor.org/packages/splatter/,
        https://github.com/Oshlack/splatter,
        http://oshlacklab.com/splatter/
BugReports: https://github.com/Oshlack/splatter/issues
Depends: R (>= 4.0), SingleCellExperiment
Imports: BiocGenerics, BiocParallel, checkmate (>= 2.0.0), crayon,
        edgeR, fitdistrplus, grDevices, locfit, matrixStats, methods,
        rlang, S4Vectors, scuttle, stats, SummarizedExperiment, utils,
        withr
Suggests: BASiCS (>= 1.7.10), BiocManager, BiocSingular, BiocStyle,
        Biostrings, covr, cowplot, GenomeInfoDb, GenomicRanges, ggplot2
        (>= 3.4.0), igraph, IRanges, knitr, limSolve, lme4, magick,
        mfa, phenopath, preprocessCore, progress, pscl, rmarkdown,
        scales, scater (>= 1.15.16), scDD, scran, SparseDC, spelling,
        testthat, VariantAnnotation, zinbwave
VignetteBuilder: knitr
biocViews: SingleCell, RNASeq, Transcriptomics, GeneExpression,
        Sequencing, Software, ImmunoOncology
Encoding: UTF-8
Language: en-GB
RoxygenNote: 7.3.2
git_url: https://git.bioconductor.org/packages/splatter
git_branch: RELEASE_3_20
git_last_commit: ac20b07
git_last_commit_date: 2024-10-29
Repository: Bioconductor 3.20
Date/Publication: 2024-10-29
NeedsCompilation: no
Packaged: 2024-10-30 03:03:44 UTC; biocbuild
Author: Luke Zappia [aut, cre] (<https://orcid.org/0000-0001-7744-8565>,
    lazappi),
  Belinda Phipson [aut] (<https://orcid.org/0000-0002-1711-7454>,
    bphipson),
  Christina Azodi [ctb] (<https://orcid.org/0000-0002-6097-606X>,
    azodichr),
  Alicia Oshlack [aut] (<https://orcid.org/0000-0001-9788-5690>)
Maintainer: Luke Zappia <luke@lazappi.id.au>
Built: R 4.4.2; ; 2024-12-23 01:06:17 UTC; unix
