add4ChannelImage	add4ChannelImage
addImageFile	addImageFile
addImageOmeTiff	addImageOmeTiff
addPlottingFactor	addPlottingFactor
addPlottingFactor,character-method	addPlottingFactor
addPlottingFactor,data.frame-method	addPlottingFactor
addPlottingFactor,factor-method	addPlottingFactor
addPlottingFactor,matrix-method	addPlottingFactor
addPlottingFactor,NanoStringGeoMxSet-method	addPlottingFactor
addPlottingFactor,numeric-method	addPlottingFactor
bookendStr	bookendStr
changeColoringIntensity	changeColoringIntensity
changeImageColoring	changeImageColoring
checkValidRes	checkValidRes
class:SpatialOverlay	SpatialOverlay-class
class:SpatialPosition	SpatialPosition-class
coords	SpatialOverlay-class
coords,SpatialOverlay-method	SpatialOverlay-class
createCoordFile	createCoordFile
createMask	createMask
cropSamples	cropSamples
cropTissue	cropTissue
downloadMouseBrainImage	downloadMouseBrainImage
flipX	flipX
flipY	flipY
fluor	SpatialOverlay-class
fluor,SpatialOverlay-method	SpatialOverlay-class
fluorLegend	fluorLegend
imageInfo	SpatialOverlay-class
imageInfo,SpatialOverlay-method	SpatialOverlay-class
labWork	SpatialOverlay-class
labWork,SpatialOverlay-method	SpatialOverlay-class
meta	SpatialPosition-class
meta,SpatialPosition-method	SpatialPosition-class
moveCoords	moveCoords
outline	SpatialOverlay-class
outline,SpatialOverlay-method	SpatialOverlay-class
overlay	SpatialOverlay-class
overlay,SpatialOverlay-method	SpatialOverlay-class
parseOverlayAttrs	parseOverlayAttrs
parseScanMetadata	parseScanMetadata
plotFactors	SpatialOverlay-class
plotFactors,SpatialOverlay-method	SpatialOverlay-class
plotSpatialOverlay	plotSpatialOverlay
position	SpatialPosition-class
position,SpatialPosition-method	SpatialPosition-class
readLabWorksheet	readLabWorksheet
readSpatialOverlay	readSpatialOverlay
recolor	recolor
removeSample	removeSample
res	SpatialOverlay-class
res,SpatialOverlay-method	SpatialOverlay-class
sampNames	SpatialOverlay-class
sampNames,SpatialOverlay-method	SpatialOverlay-class
scaleBarRatio	SpatialOverlay-class
scaleBarRatio,SpatialOverlay-method	SpatialOverlay-class
scaled	SpatialOverlay-class
scaled,SpatialOverlay-method	SpatialOverlay-class
scanMeta	SpatialOverlay-class
scanMeta,SpatialOverlay-method	SpatialOverlay-class
seg	SpatialOverlay-class
seg,SpatialOverlay-method	SpatialOverlay-class
show,SpatialOverlay-method	SpatialOverlay-class
show,SpatialPosition-method	SpatialPosition-class
showImage	SpatialOverlay-class
showImage,SpatialOverlay-method	SpatialOverlay-class
slideName	SpatialOverlay-class
slideName,SpatialOverlay-method	SpatialOverlay-class
SpatialOverlay	SpatialOverlay-class
SpatialOverlay,character-method	SpatialOverlay-class
SpatialOverlay-class	SpatialOverlay-class
spatialPos	SpatialPosition-class
spatialPos,SpatialPosition-method	SpatialPosition-class
SpatialPosition	SpatialPosition-class
SpatialPosition,data.frame-method	SpatialPosition-class
SpatialPosition,environment-method	SpatialPosition-class
SpatialPosition,matrix-method	SpatialPosition-class
SpatialPosition,missing-method	SpatialPosition-class
SpatialPosition-class	SpatialPosition-class
workflow	SpatialOverlay-class
workflow,SpatialOverlay-method	SpatialOverlay-class
xmlExtraction	xmlExtraction
