as.alpha	as.alpha
as.alpha.in.range	as.alpha.in.range
as.beta	as.beta
as.beta.in.range	as.beta.in.range
as.loglik.progression	as.loglik.progression
as.loglik.progression.in.range	as.loglik.progression.in.range
as.mean.squared.error	as.mean.squared.error
as.starting.beta	as.starting.beta
as.starting.beta.in.range	as.starting.beta.in.range
background	background
cv_example	cv_example
evaluate.lambda.range	evaluate.lambda.range
import.counts.data	import.counts.data
lambda_range_example	lambda_range_example
mutation_categories	mutation_categories
nmf.LassoCV	nmf.LassoCV
nmf.LassoK	nmf.LassoK
nmf_LassoK_example	nmf_LassoK_example
patient.plot	patient.plot
patients	patients
signatures.plot	signatures.plot
ssm560_reduced	ssm560_reduced
starting.betas.estimation	starting.betas.estimation
starting_betas_example	starting_betas_example
