# Spatial Transcriptomics Analysis

## Documentation for package ‘Spaniel’ version 1.4.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

createSCE | Create a SingleCellExperiment Object From Spatial Transcriptomics Data
createSeurat | Create a Seurat Object From Spatial Transcriptomics Data
markClusterCol | markClusterCol
parseImage | This function parses a HE image to use as the background for plots
removeSpots | removeSpots
runShinySpaniel | RunShinySpaniel
selectSpots | selectSpots
spanielPlot | Spatial Transcriptomics Plot