{
  "channels": [
    "file:///opt/host-conda-bld",
    "https://conda.anaconda.org/conda-forge",
    "https://conda.anaconda.org/bioconda",
    "https://repo.anaconda.com/pkgs/main",
    "https://conda.anaconda.org/conda-forge",
    "https://conda.anaconda.org/bioconda",
    "https://repo.anaconda.com/pkgs/main"
  ],
  "conda_build_version": "3.21.4",
  "conda_private": false,
  "conda_version": "4.8.4",
  "description": "The soGGi package provides a toolset to create genomic interval aggregate/summary plots of signal or motif occurence from BAM and bigWig files as well as PWM, rlelist, GRanges and GAlignments Bioconductor objects. soGGi allows for normalisation, transformation and arithmetic operation on and between summary plot objects as well as grouping and subsetting of plots by GRanges objects and user supplied metadata. Plots are created using the GGplot2 libary to allow user defined manipulation of the returned plot object. Coupled together, soGGi features a broad set of methods to visualise genomics data in the context of groups of genomic intervals such as genes, superenhancers and transcription factor binding events.",
  "env_vars": {
    "CIO_TEST": "<not set>"
  },
  "extra": {
    "copy_test_source_files": true,
    "final": true,
    "identifiers": [
      "biotools:soggi",
      "doi:10.1038/nmeth.3252"
    ],
    "parent_recipe": {
      "name": "bioconductor-soggi",
      "path": "recipes/bioconductor-soggi",
      "version": "1.12.0"
    }
  },
  "home": "https://bioconductor.org/packages/3.12/bioc/html/soGGi.html",
  "identifiers": [],
  "keywords": [],
  "license": "GPL (>= 3)",
  "license_file": "/opt/conda/conda-bld/bioconductor-soggi_1617121042710/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/lib/R/share/licenses/GPL-3",
  "root_pkgs": [
    "pycparser 2.20 pyh9f0ad1d_2",
    "libedit 3.1.20191231 he28a2e2_2",
    "patchelf 0.11 he1b5a44_0",
    "pip 21.0.1 pyhd8ed1ab_0",
    "pkginfo 1.7.0 pyhd8ed1ab_0",
    "ripgrep 12.1.1 h516909a_1",
    "pytz 2021.1 pyhd8ed1ab_0",
    "expat 2.2.10 h9c3ff4c_0",
    "liblief 0.10.1 he1b5a44_2",
    "zstd 1.4.8 ha95c52a_1",
    "yaml 0.2.5 h516909a_0",
    "icu 68.1 h58526e2_0",
    "attrs 20.3.0 pyhd3deb0d_0",
    "ncurses 6.2 h58526e2_4",
    "libxml2 2.9.10 h72842e0_3",
    "lz4-c 1.9.3 h9c3ff4c_0",
    "clyent 1.2.2 py_1",
    "python-dateutil 2.8.1 py_0",
    "xz 5.2.5 h516909a_1",
    "su-exec 0.2 h516909a_1002",
    "c-ares 1.17.1 h36c2ea0_0",
    "tini 0.18.0 h14c3975_1001",
    "glob2 0.7 py_0",
    "ipython_genutils 0.2.0 py_1",
    "zipp 3.4.0 py_0",
    "filelock 3.0.12 pyh9f0ad1d_0",
    "_openmp_mutex 4.5 1_gnu",
    "wheel 0.36.2 pyhd3deb0d_0",
    "soupsieve 2.0.1 py_1",
    "zlib 1.2.11 h516909a_1010",
    "libstdcxx-ng 9.3.0 h6de172a_18",
    "libev 4.33 h516909a_1",
    "libgomp 9.3.0 h2828fa1_18",
    "six 1.15.0 pyh9f0ad1d_0",
    "importlib_metadata 3.4.0 hd8ed1ab_0",
    "traitlets 5.0.5 py_0",
    "ld_impl_linux-64 2.35.1 hea4e1c9_2",
    "nbformat 5.1.2 pyhd8ed1ab_1",
    "bzip2 1.0.8 h7f98852_4",
    "libiconv 1.16 h516909a_0",
    "libgcc-ng 9.3.0 h2828fa1_18",
    "tk 8.6.10 h21135ba_1",
    "ca-certificates 2020.12.5 ha878542_0",
    "pcre 8.44 he1b5a44_0",
    "patch 2.7.6 h7f98852_1002",
    "_libgcc_mutex 0.1 conda_forge",
    "lzo 2.10 h516909a_1000",
    "perl 5.32.0 h36c2ea0_0",
    "future 0.18.2 py37h89c1867_3",
    "setuptools 49.6.0 py37h89c1867_3",
    "click 7.1.2 pyh9f0ad1d_0",
    "importlib-metadata 3.4.0 py37h89c1867_0",
    "sphinx 3.5.3 pyhd8ed1ab_0",
    "conda-build 3.21.4 py37h89c1867_0",
    "pycosat 0.6.3 py37h5e8e339_1006",
    "gitdb2 3.0.2 py_0",
    "vine 1.3.0 py_0",
    "gunicorn 19.9.0 py37_1000",
    "jsonschema 2.6.0 py37_1002",
    "aiohttp-security 0.4.0 py_0",
    "sphinxcontrib-applehelp 1.0.2 py_0",
    "billiard 3.6.3.0 py37h5e8e339_3",
    "galaxy-lib 19.5.2 pyh864c0ab_1",
    "beautifulsoup4 4.6.3 py37_1000",
    "conda-forge-pinning 2021.03.17.11.02.03 hd8ed1ab_0",
    "python_abi 3.7 1_cp37m",
    "libarchive 3.3.3 ha149a29_1000",
    "gitpython 3.0.8 py_0",
    "jinja2 2.10.3 py_0",
    "async-timeout 3.0.1 py_1000",
    "uritemplate 3.0.1 py_0",
    "pyjwt 1.7.1 py_0",
    "sphinxcontrib-devhelp 1.0.2 py_0",
    "aioftp 0.12.0 py_0",
    "pyyaml 5.4.1 py37h5e8e339_0",
    "aioredis 1.2.0 py_0",
    "snowballstemmer 2.1.0 pyhd8ed1ab_0",
    "alabaster 0.7.12 py_0",
    "greenlet 1.0.0 py37hcd2ae1e_0",
    "typing-extensions 3.7.4.3 0",
    "sphinxcontrib-htmlhelp 1.0.3 py_0",
    "aiohttp 3.4.4 py37h14c3975_1000",
    "jupyter_core 4.7.1 py37h89c1867_0",
    "cryptography 2.5 py37hb7f436b_1",
    "simplejson 3.17.2 py37h5e8e339_2",
    "sphinx-autodoc-typehints 1.11.1 py_0",
    "decorator 4.4.2 py_0",
    "python-libarchive-c 2.9 py37h89c1867_2",
    "argh 0.26.2 pyh9f0ad1d_1002",
    "multidict 4.7.5 py37h5e8e339_2",
    "backoff 1.6.0 py_1",
    "certifi 2020.12.5 py37h89c1867_1",
    "liblapack 3.9.0 8_openblas",
    "cachetools 3.0.0 py_0",
    "packaging 20.9 pyh44b312d_0",
    "libffi 3.2.1 he1b5a44_1007",
    "skopeo 0.1.35 haa36a5b_1",
    "libcblas 3.9.0 8_openblas",
    "pandas 0.23.4 py37h637b7d7_1000",
    "sphinxcontrib-serializinghtml 1.1.4 py_0",
    "libgfortran-ng 9.3.0 hff62375_18",
    "pyaml 17.12.1 py_0",
    "babel 2.9.0 pyhd3deb0d_0",
    "psutil 5.8.0 py37h5e8e339_1",
    "conda-package-handling 1.7.2 py37hb5d75c8_0",
    "asn1crypto 1.4.0 pyh9f0ad1d_0",
    "conda 4.8.4 py37hc8dfbb8_2",
    "readline 7.0 hf8c457e_1001",
    "regex 2018.08.29 py37h14c3975_1000",
    "libgfortran5 9.3.0 hff62375_18",
    "aiohttp-session 2.7.0 py_0",
    "yarl 1.6.3 py37h5e8e339_1",
    "colorlog 3.1.4 py37_1000",
    "openssl 1.0.2u h516909a_0",
    "amqp 2.6.1 pyh9f0ad1d_0",
    "gidgethub 3.0.0 py_0",
    "markupsafe 1.1.1 py37h5e8e339_3",
    "markdown 3.1.1 py_0",
    "idna 2.8 py37_1000",
    "smmap2 3.0.1 py_0",
    "aiohttp-jinja2 1.1.2 py_0",
    "python 3.7.1 hd21baee_1001",
    "involucro 1.1.2 he881be0_3",
    "pyopenssl 19.0.0 py37_0",
    "kombu 4.6.11 py37hc8dfbb8_0",
    "smmap 4.0.0 pyhd8ed1ab_1",
    "colorama 0.4.4 pyh9f0ad1d_0",
    "pygments 2.8.1 pyhd8ed1ab_0",
    "py-lief 0.10.1 py37hb892b2f_2",
    "sphinxcontrib-qthelp 1.0.3 py_0",
    "imagesize 1.2.0 py_0",
    "sqlalchemy 1.4.3 py37h5e8e339_0",
    "aiofiles 0.4.0 py_1001",
    "conda-verify 3.1.1 py37h89c1867_1003",
    "ruamel_yaml 0.15.80 py37h5e8e339_1004",
    "hiredis 1.1.0 py37h8f50634_1",
    "urllib3 1.25.8 py37hc8dfbb8_1",
    "pysocks 1.7.1 py37h89c1867_3",
    "numpy 1.19.5 py37haa41c4c_1",
    "requests 2.22.0 py37_1",
    "cffi 1.14.4 py37h11fe52a_0",
    "libopenblas 0.3.12 pthreads_h4812303_1",
    "celery 4.2.2 py_0",
    "sphinxcontrib-jsmath 1.0.1 py_0",
    "chardet 3.0.4 py37he5f6b98_1008",
    "curl 7.52.1 0",
    "pyparsing 2.4.7 pyh9f0ad1d_0",
    "docutils 0.16 py37h89c1867_3",
    "libblas 3.9.0 8_openblas",
    "git 2.14.2 1",
    "typing_extensions 3.7.4.3 py_0",
    "networkx 1.11 py37_1",
    "sqlite 3.28.0 h8b20d00_0",
    "tqdm 4.59.0 pyhd8ed1ab_0",
    "boltons 18.0.1 py_0",
    "anaconda-client 1.6.14 py_0"
  ],
  "summary": "Visualise ChIP-seq, MNase-seq and motif occurrence as aggregate plots Summarised Over Grouped Genomic Intervals",
  "tags": []
}