# Interactive visualization for Illumina methylation arrays

## Documentation for package ‘shinyMethyl’ version 1.20.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

shinyMethyl-package | Interactive visualization for Illumina methylation arrays
combine | shinyMethylSet instances
combine-method | shinyMethylSet instances
getBeta | shinyMethylSet instances
getBeta-method | shinyMethylSet instances
getCN | shinyMethylSet instances
getCN-method | shinyMethylSet instances
getGreenControls | shinyMethylSet instances
getM | shinyMethylSet instances
getM-method | shinyMethylSet instances
getMeth | shinyMethylSet instances
getMeth-method | shinyMethylSet instances
getPCA | shinyMethylSet instances
getRedControls | shinyMethylSet instances
getUnmeth | shinyMethylSet instances
getUnmeth-method | shinyMethylSet instances
orderByName | shinyMethylSet instances
pData | shinyMethylSet instances
pData-method | shinyMethylSet instances
runShinyMethyl | Run the interactive shinyMethyl session
sampleNames | shinyMethylSet instances
sampleNames-method | shinyMethylSet instances
shinyMethyl | Interactive visualization for Illumina methylation arrays
shinyMethylSet | shinyMethylSet instances
shinyMethylSet-class | shinyMethylSet instances
shinySummarize | Summarizing a large 450K experiment into a shinyMethylSet
shinySummarize-method | Summarizing a large 450K experiment into a shinyMethylSet
shinySummarize-methods | Summarizing a large 450K experiment into a shinyMethylSet
show-method | shinyMethylSet instances