sesame-package	sesame-package
addMask	addMask
aggregateTestEnrichments	aggregateTestEnrichments
assemble_plots	assemble_plots
betasCollapseToPfx	betasCollapseToPfx
BetaValueToMValue	BetaValueToMValue
binSignals	binSignals
bisConversionControl	bisConversionControl
calcEffectSize	calcEffectSize
checkLevels	checkLevels
chipAddressToSignal	chipAddressToSignal
cnSegmentation	cnSegmentation
compareDatbaseSetOverlap	compareDatbaseSetOverlap
compareMouseStrainReference	compareMouseStrainReference
compareMouseTissueReference	compareMouseTissueReference
compareReference	compareReference
controls	controls
convertProbeID	convertProbeID
createDBNetwork	createDBNetwork
createUCSCtrack	createUCSCtrack
dataFrame2sesameQC	dataFrame2sesameQC
dbStats	dbStats
deIdentify	deidentify
detectionPnegEcdf	detectionPnegEcdf
diffRefSet	diffRefSet
dmContrasts	dmContrasts
DML	DML
DMLpredict	DMLpredict
DMR	DMR
dyeBiasCorr	dyeBiasCorr
dyeBiasCorrMostBalanced	dyeBiasCorrMostBalanced
dyeBiasCorrTypeINorm	dyeBiasNL
dyeBiasL	dyeBiasL
dyeBiasNL	dyeBiasNL
ELBAR	ELBAR
estimateLeukocyte	estimateLeukocyte
formatVCF	formatVCF
getAFs	getAFs
getAFTypeIbySumAlleles	getAFTypeIbySumAlleles
getBetas	getBetas
getBinCoordinates	getBinCoordinates
getMask	getMask
getRefSet	getRefSet
imputeBetas	imputeBetas
imputeBetasByGenomicNeighbors	imputeBetasByGenomicNeighbors
imputeBetasMatrixByMean	imputeBetasMatrixByMean
inferEthnicity	inferEthnicity
inferInfiniumIChannel	inferInfiniumIChannel
inferSex	inferSex
inferSpecies	inferSpecies
inferStrain	inferStrain
inferTissue	inferTissue
initFileSet	initFileSet
KYCG_annoProbes	KYCG_annoProbes
KYCG_buildGeneDBs	KYCG_buildGeneDBs
KYCG_getDBs	KYCG_getDBs
KYCG_listDBGroups	KYCG_listDBGroups
KYCG_loadDBs	KYCG_loadDBs
KYCG_plotBar	KYCG_plotBar
KYCG_plotDot	KYCG_plotDot
KYCG_plotEnrichAll	KYCG_plotEnrichAll
KYCG_plotLollipop	KYCG_plotLollipop
KYCG_plotManhattan	KYCG_plotManhattan
KYCG_plotMeta	KYCG_plotMeta
KYCG_plotMetaEnrichment	KYCG_plotMetaEnrichment
KYCG_plotPointRange	KYCG_plotPointRange
KYCG_plotSetEnrichment	KYCG_plotSetEnrichment
KYCG_plotVolcano	KYCG_plotVolcano
KYCG_plotWaterfall	KYCG_plotWaterfall
liftOver	liftOver
listAvailableMasks	listAvailableMasks
mapFileSet	mapFileSet
mapToMammal40	mapToMammal40
matchDesign	matchDesign
meanIntensity	meanIntensity
medianTotalIntensity	medianTotalIntensity
mLiftOver	mLiftOver
MValueToBetaValue	MValueToBetaValue
negControls	negControls
noMasked	noMasked
noob	noob
normControls	normControls
openSesame	openSesame
openSesameToFile	openSesameToFile
palgen	palgen
parseGEOsignalMU	parseGEOsignalMU
pOOBAH	pOOBAH
predictAge	predictAge
predictAgeHorvath353	predictAgeHorvath353
predictAgeSkinBlood	predictAgeSkinBlood
predictMouseAgeInMonth	predictMouseAgeInMonth
prefixMask	prefixMask
prefixMaskButC	prefixMaskButC
prefixMaskButCG	prefixMaskButCG
prepSesame	prepSesame
prepSesameList	prepSesameList
print.DMLSummary	print.DMLSummary
print.fileSet	print.fileSet
probeID_designType	probeID_designType
probeSuccessRate	probeSuccessRate
qualityMask	qualityMask
readFileSet	readFileSet
readIDATpair	readIDATpair
recommendedMaskNames	recommendedMaskNames
reIdentify	reIdentify
resetMask	resetMask
scrub	scrub
scrubSoft	scrubSoft
SDFcollapseToPfx	SDFcollapseToPfx
sdfPlatform	sdfPlatform
sdf_read_table	sdf_read_table
sdf_write_table	sdf_write_table
searchIDATprefixes	searchIDATprefixes
segmentBins	segmentBins
sesame	sesame-package
sesameAnno_attachManifest	sesameAnno_attachManifest
sesameAnno_buildAddressFile	sesameAnno_buildAddressFile
sesameAnno_buildManifestGRanges	sesameAnno_buildManifestGRanges
sesameAnno_download	sesameAnno_download
sesameAnno_readManifestTSV	sesameAnno_readManifestTSV
sesameQC-class	sesameQC-class
sesameQCtoDF	sesameQCtoDF
sesameQC_calcStats	sesameQC_calcStats
sesameQC_getStats	sesameQC_getStats
sesameQC_plotBar	sesameQC_plotBar
sesameQC_plotBetaByDesign	sesameQC_plotBetaByDesign
sesameQC_plotHeatSNPs	sesameQC_plotHeatSNPs
sesameQC_plotIntensVsBetas	sesameQC_plotIntensVsBetas
sesameQC_plotRedGrnQQ	sesameQC_plotRedGrnQQ
sesameQC_rankStats	sesameQC_rankStats
sesame_checkVersion	sesame_checkVersion
sesamize	sesamize
setMask	setMask
SigDF	SigDF
signalMU	signalMU
sliceFileSet	sliceFileSet
summaryExtractTest	summaryExtractTest
testEnrichment	testEnrichment
testEnrichmentFisher	testEnrichmentFisher
testEnrichmentGene	testEnrichmentGene
testEnrichmentSEA	testEnrichmentSEA
testEnrichmentSpearman	testEnrichmentSpearman
totalIntensities	totalIntensities
twoCompsEst2	twoCompsEst2
updateSigDF	updateSigDF
visualizeGene	visualizeGene
visualizeProbes	visualizeProbes
visualizeRegion	visualizeRegion
visualizeSegments	visualizeSegments
