.scHOT	scHOT-class
liver	liver
MOB_subset	MOB_subset
params<-	params-set
plotColouredExpression	plotColouredExpression
plotEgoNetwork	plotEgoNetwork
plotHigherOrderSequence	plotHigherOrderSequence
plotOrderedExpression	plotOrderedExpression
positionColData<-	positionColData-set
positionType<-	positionType-set
scHOT	scHOT
scHOT-class	scHOT-class
scHOT_addTestingScaffold	scHOT_addTestingScaffold
scHOT_buildFromMatrix	scHOT_buildFromMatrix
scHOT_buildFromSCE	scHOT_buildFromSCE
scHOT_calculateGlobalHigherOrderFunction	scHOT_calculateGlobalHigherOrderFunction
scHOT_calculateHigherOrderTestStatistics	scHOT_calculateHigherOrderTestStatistics
scHOT_estimatePvalues	scHOT_estimatePvalues
scHOT_output<-	scHOT_output-set
scHOT_performPermutationTest	scHOT_performPermutationTest
scHOT_plotPermutationDistributions	scHOT_plotPermutationDistributions
scHOT_setPermutationScaffold	scHOT_setPermutationScaffold
scHOT_setWeightMatrix	scHOT_setWeightMatrix
scHOT_stripOutput	scHOT_stripOutput
spatialWeightMatrix	spatialWeightMatrix
testingScaffold<-	testingScaffold-set
thin	thin
trajectoryWeightMatrix	trajectoryWeightMatrix
weightedPearson	weightedPearson
weightedSpearman	weightedSpearman
weightedVariance	weightedVariance
weightedZIKendall	weightedZIKendall
weightedZISpearman	weightedZISpearman
weightMatrix<-	weightMatrix-set
