Package: scds
Type: Package
Title: In-Silico Annotation of Doublets for Single Cell RNA Sequencing
        Data
Version: 1.22.0
Authors@R: c(person("Dennis", "Kostka", role=c("aut", "cre"),
        email="kostka@pitt.edu"), person("Bais", "Abha",
        role=c("aut"), email="abhabais@pitt.edu"))
Description: In single cell RNA sequencing (scRNA-seq) data combinations of cells are sometimes considered a single cell (doublets). The scds package provides methods to annotate doublets in scRNA-seq data computationally.
License: MIT + file LICENSE
Encoding: UTF-8
biocViews: SingleCell, RNASeq, QualityControl, Preprocessing,
        Transcriptomics, GeneExpression, Sequencing, Software,
        Classification
RoxygenNote: 6.1.1
Depends: R (>= 3.6.0)
Imports: Matrix, S4Vectors, SingleCellExperiment, SummarizedExperiment,
        xgboost, methods, stats, dplyr, pROC
Suggests: BiocStyle, knitr, rsvd, Rtsne, scater, cowplot, rmarkdown
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/scds
git_branch: RELEASE_3_20
git_last_commit: 9ee5a7c
git_last_commit_date: 2024-10-29
Repository: Bioconductor 3.20
Date/Publication: 2024-10-29
NeedsCompilation: no
Packaged: 2024-10-30 02:41:22 UTC; biocbuild
Author: Dennis Kostka [aut, cre],
  Bais Abha [aut]
Maintainer: Dennis Kostka <kostka@pitt.edu>
Built: R 4.4.3; ; 2025-03-20 17:15:35 UTC; unix
