RTCGAToolbox-package	RTCGAToolbox
biocExtract	biocExtract
CorResult-class	CorResult-class
DGEResult-class	DGEResult-class
FirehoseCGHArray-class	FirehoseCGHArray-class
FirehoseData-class	FirehoseData-class
FirehoseGISTIC-class	FirehoseGISTIC-class
FirehoseMethylationArray-class	FirehoseMethylationArray-class
FirehosemRNAArray-class	FirehosemRNAArray-class
getBroadSubtypes	getBroadSubtypes
getCNGECorrelation	getCNGECorrelation
getData	getData
getData,FirehoseData-method	FirehoseData-class
getDiffExpressedGenes	getDiffExpressedGenes
getFirehoseAnalyzeDates	getFirehoseAnalyzeDates
getFirehoseData	getFirehoseData
getFirehoseDatasets	getFirehoseDatasets
getFirehoseRunningDates	getFirehoseRunningDates
getGISTICPeaks	getGISTICPeaks
getMutationRate	getMutationRate
getReport	getReport
getSurvival	getSurvival
hg19.ucsc.gene.locations	hg19.ucsc.gene.locations
isEmpty,FirehoseGISTIC-method	FirehoseGISTIC-class
RTCGASample	RTCGASample
RTCGAToolbox	RTCGAToolbox
selectType	selectType
selectType,FirehoseData-method	FirehoseData-class
show,FirehoseData-method	FirehoseData-class
showResults	showResults
showResults,CorResult,CorResult-method	showResults-CorResult
showResults,CorResult-method	showResults-CorResult
showResults,DGEResult,DGEResult-method	showResults-DGEResult
showResults,DGEResult-method	showResults-DGEResult
updateObject,FirehoseData-method	FirehoseData-class
updateObject,FirehoseGISTIC-method	FirehoseGISTIC-class
