# Rotation based gene set analysis

## Documentation for package ‘roastgsa’ version 1.4.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

dragtable | dragtable for html writings
expr.tcga | Tumor Bladder TCGA data
fd.tcga | Tumor Bladder TCGA data
hallmarks.hs | Hallmarks homo sapiens gene symbol
heatmaprgsa_hm | Heatmap of roastgsa results
htmlrgsa | roastgsa results in html form
kegg.hs | KEGG genesets homo sapiens entrez
pd.tcga | Tumor Bladder TCGA data
plot.roastgsa | roastgsa plot
plot.ssGSA | Plot single sample Gene Set Analysis
ploteffsignaturesize | roastgsa effective signature size
plotGSEA | GSEA plot
plotStats | General GSA plot
print.roastgsa | Rotation-based Gene Set Analysis
print.ssGSA | Single sample Gene Set Analysis
roastgsa | Rotation-based Gene Set Analysis
sorttable | sorttable for html writings
ssGSA | Single sample Gene Set Analysis
varrotrand | roastgsa variance rotations under gene randomization