CHANGES IN VERSION 1.15.2
-----------------------
    
    o Updated the vignette with a new url for gtf files
    o ranges() for Hits -> overlapsRanges()

CHANGES IN VERSION 1.9.1
-----------------------
    
    o Updated the vignette with some details about overlapping gene features

CHANGES IN VERSION 1.7.6
-----------------------
    
BUG FIXES

    o Now correcly using only reads falling on PRE portions in methods countResults and fpkmResults
      also for RoarDatasetMultipleAPA objects.
    
CHANGES IN VERSION 1.7.2
-----------------------
    o New code to efficiently consider more than a single APA foreach gene 
      - under active development (man pages, vignettes and UnitTests are being updated)

    o Tests now performed with testthat
    
BUG FIXES

    o No changes classified as 'bug fixes'

CHANGES IN VERSION 1.7.1
-----------------------

NEW FEATURES
   
    o Now the gtf can contain an attribute that represents the lengths of PRE and POST 
      portions on the transcriptome. 
      If this is omitted the lengths on the genome are used (like before). 
      Note that right now every gtf entry (or none of them) should have it.
      
BUG FIXES

    o No changes classified as 'bug fixes'

CHANGES IN VERSION 1.1.2
-----------------------

NEW FEATURES
   
    o New code to deal with experimental setups with a natural pairing between   
      treatment and control samples. The user have to define the pairings 
      and the resulting p-values of the independent tests are combined
      with the Fisher method. A method that corrects these p-values
      (and also those obtained in single samples settings) considering the
      multiple testing issue has also been added.
      
BUG FIXES

    o No changes classified as 'bug fixes'

CHANGES IN VERSION 0.99.6
-----------------------

NEW FEATURES

    o No new features, just adopted the suggested format for the NEWS file
   
BUG FIXES

    o No changes classified as 'bug fixes'

