# RLSeq: An analysis package for R-loop mapping data

## Documentation for package ‘RLSeq’ version 1.0.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

analyzeRLFS | Analyze RLFS
auxdata | Auxiliary Data
available_genomes | Available Genomes
checkRLFSAnno | Check RLFS
corrAnalyze | Analyze Correlations
corrHeatmap | Plot Correlation Results
featureEnrich | Test Genomic Feature Enrichment
feature_ggplot | Feature ggplot
geneAnnotation | Annotate R-Loops with Genes
genomeMasks | Genome Masks
getChromSizes | Get Chrom Sizes
getGSSignal | Get GS Signal
getRLFSAnno | Get RLFS
peak_stats | Build peak statistics tibble
plotEnrichment | Plot Enrichment Test Results
plotRLFSRes | Plot RLFS analysis results
plotRLRegionOverlap | Plot RL-Region overlap with RLRanges
predictCondition | Predict Condition
report | RLSeq Report
RLRanges | Construct RLRanges Dataset
RLRanges-class | Construct RLRanges Dataset
RLRangesFromRLBase | Access RLBase samples as RLRanges
rlRegionTest | R-Loop region test
rlresult | RLSeq Results
RLResults | RLSeq Results
RLResults-class | RLSeq Results
RLSeq | RLSeq
tableToRegions | Table to Regions
urlExists | Check if URL exists