Rariant-package	Rariant-package
acCi	prop-cis
baseFillScale	colorscales
callConsensus	mismatch-utils
ciAdjustLevel	ci-adjust
ciCovers	ci-utils
ciOutside	ci-utils
ciOverlap	ci-utils
ciWidth	ci-utils
coverageProbability	ci-assessment
eventFillScale	colorscales
evidenceHeatmap	evidence-heatmap
feTest	prop-tests
filterCalls	multi-utils
findCalls	multi-utils
gr2pos	convert-utils
mergeCalls	multi-utils
mismatchCount	mismatch-utils
mismatchUtils	mismatch-utils
nhsCi	prop-cis
nmTest	prop-tests
plotAbundanceShift	plot-cis
plotCIs	plot-cis
plotConfidenceIntervals	plot-cis
pos2gr	convert-utils
propCIs	prop-cis
propTests	prop-tests
Rariant	Rariant-package
rariant	rariant
rariant,array,array,GRanges-method	rariant
rariant,BamFile,BamFile,GRanges-method	rariant
rariant,character,character,GRanges-method	rariant
rariant-methods	rariant
rariantInspect	shiny
rariantStandalone	rariant
rateFillScale	colorscales
readRariant	rariant
scoreTest	prop-tests
selectStrand	mismatch-utils
seqDepth	mismatch-utils
splitSample	split-sample
splitSampleBinom	split-sample
tallyBamRegion	tally
tallyPlot	mismatch-plot
updateCalls	multi-utils
verdictColorScale	colorscales
writeRariant	rariant
yesNoMaybe	yesnomaybe
