{% set version = "1.6.0" %}
{% set name = "qsvaR" %}
{% set bioc = "3.18" %}

package:
  name: 'bioconductor-{{ name|lower }}'
  version: '{{ version }}'
source:
  url:
    - 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
    - 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/Archive/{{ name }}/{{ name }}_{{ version }}.tar.gz'
    - 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
    - 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
  md5: e9531cc164f93967a5d5d0469d47f7c7
build:
  number: 0
  rpaths:
    - lib/R/lib/
    - lib/
  run_exports: '{{ pin_subpackage("bioconductor-qsvar", max_pin="x.x") }}'
  noarch: generic
# Suggests: BiocFileCache, BiocStyle, covr, knitr, limma, RefManageR, rmarkdown, sessioninfo, testthat (>= 3.0.0)
requirements:
  host:
    - 'bioconductor-summarizedexperiment >=1.32.0,<1.33.0'
    - 'bioconductor-sva >=3.50.0,<3.51.0'
    - r-base
    - r-ggplot2
  run:
    - 'bioconductor-summarizedexperiment >=1.32.0,<1.33.0'
    - 'bioconductor-sva >=3.50.0,<3.51.0'
    - r-base
    - r-ggplot2
test:
  commands:
    - '$R -e "library(''{{ name }}'')"'
about:
  home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
  license: Artistic-2.0
  summary: 'Generate Quality Surrogate Variable Analysis for Degradation Correction'
  description: 'The qsvaR package contains functions for removing the effect of degration in rna-seq data from postmortem brain tissue. The package is equipped to help users generate principal components associated with degradation. The components can be used in differential expression analysis to remove the effects of degradation.'

