pwIntOmics-package	pwIntOmics-package
addFeedbackLoops	addFeedbackLoops
clusterTimeProfiles	clusterTimeProfiles
consDynamicNet	consDynamicNet
createBiopaxnew	createBiopaxnew
createIntIDs	createIntIDs
findSignalingAxes	findSignalingAxes
findxneighborsoverlap	findxneighborsoverlap
findxnextneighbors	findxnextneighbors
generate_DSSignalingBase	generate_DSSignalingBase
genfullConsensusGraph	genfullConsensusGraph
genGenelists	genGenelists
genGenelistssub	genGenelistssub
genIntIDs	genIntIDs
getAliasfromSTRINGIDs	getAliasfromSTRINGIDs
getAlias_Ensemble	getAlias_Ensemble
getBiopaxModel	getBiopaxModel
getbipartitegraphInfo	getbipartitegraphInfo
getConsensusSTRINGIDs	getConsensusSTRINGIDs
getDS_PWs	getDS_PWs
getDS_TFs	getDS_TFs
getDS_TGs	getDS_TGs
getFCsplines	getFCsplines
getGenesIntersection	getGenesIntersection
getOmicsallGeneIDs	getOmicsallGeneIDs
getOmicsallProteinIDs	getOmicsallProteinIDs
getOmicsDataset	getOmicsDataset
getOmicsTimepoints	getOmicsTimepoints
getProteinIntersection	getProteinIntersection
getSTRING_graph	getSTRING_graph
getTFIntersection	getTFIntersection
gettpIntersection	gettpIntersection
getUS_PWs	getUS_PWs
getUS_regulators	getUS_regulators
getUS_TFs	getUS_TFs
get_matching_transcripts	get_matching_transcripts
identifyPR	identifyPR
identifyPWs	identifyPWs
identifyPWTFTGs	identifyPWTFTGs
identifyRsofTFs	identifyRsofTFs
identifyTFs	identifyTFs
identPWsofTFs	identPWsofTFs
identRegulators	identRegulators
identTFs	identTFs
identTFTGsinPWs	identTFTGsinPWs
infoConsensusGraph	infoConsensusGraph
loadGenelists	loadGenelists
loadPWs	loadPWs
OmicsExampleData	OmicsExampleData
plotConsDynNet	plotConsDynNet
plotConsensusGraph	plotConsensusGraph
plotConsensusProfiles	plotConsensusProfiles
plotTimeProfileClusters	plotTimeProfileClusters
predictFCvals	predictFCvals
preparePWinfo	preparePWinfo
print.OmicsData	print.OmicsData
PWidentallprots	PWidentallprots
PWidentallprotssub	PWidentallprotssub
PWidenttps	PWidenttps
pwIntOmics	pwIntOmics-package
readOmics	readOmics
readPhosphodata	readPhosphodata
readPWdata	readPWdata
readTFdata	readTFdata
readTFtargets	readTFtargets
selectPWsofTFs	selectPWsofTFs
staticConsensusNet	staticConsensusNet
SteinerTree_cons	SteinerTree_cons
temp_correlations	temp_correlations
TFidentallgenes	TFidentallgenes
TFidenttps	TFidenttps
