# User-friendly Workflow for Pre-processing and Statistical Analysis of Mass Spectrometry Data

## Documentation for package ‘POMA’ version 1.0.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

PomaBoxplots | Classical Boxplots
PomaClust | Cluster Analysis
PomaCorr | Correlation Analysis
PomaDensity | Distribution Plot
PomaEDA | Automatic Exploratory Data Analysis PDF Report
PomaHeatmap | Classical Heatmap
PomaImpute | Collettion of Imputation Methods for Mass Spectrometry Data
PomaLasso | Lasso, Ridge and Elasticnet Regularized Generalized Linear Models for Binary Outcomes
PomaLimma | Implementation of limma R Package on Mass Spectrometry Data
PomaMSnSetClass | Convert data frames to a MSnSet Object
PomaMultivariate | Multivariate Statistical Methods for Mass Spectrometry Data
PomaNorm | Collection of Normalization Methods for Mass Spectrometry Data
PomaOddsRatio | Logistic Regression Model Odds Ratios
PomaOutliers | Remove and Analyze Outliers
PomaRandForest | Classification Random Forest for Mass Spectrometry Data
PomaRankProd | Rank Product/Rank Sum Analysis for Mass Spectrometry Data
PomaUnivariate | Univariate Statistical Methods for Mass Spectrometry Data
PomaVolcano | Volcano Plot
st000284 | Colorectal Cancer Detection Using Targeted Serum Metabolic Profiling
st000336 | Targeted LC/MS of urine from boys with DMD and controls