Package: plyranges
Type: Package
Title: A fluent interface for manipulating GenomicRanges
Version: 1.4.3
Authors@R: c(
      person("Stuart", "Lee", email = "lee.s@wehi.edu.au", role = c("aut", "cre")),
      person("Michael", "Lawrence", role = c("aut", "ctb")),
      person("Dianne", "Cook", role = c("aut", "ctb"))
    )
Maintainer: Stuart Lee <lee.s@wehi.edu.au>
Description: A dplyr-like interface for interacting with the common Bioconductor 
    classes Ranges and GenomicRanges. By providing a grammatical
    and consistent way of manipulating these classes their accessiblity for new
    Bioconductor users is hopefully increased.
Depends: R (>= 3.5), methods, BiocGenerics, IRanges (>= 2.12.0),
        GenomicRanges (>= 1.28.4)
Imports: dplyr, rlang (>= 0.2.0), magrittr, tidyr, tidyselect,
        rtracklayer, GenomicAlignments, GenomeInfoDb, Rsamtools,
        S4Vectors (>= 0.17.41), utils
biocViews: Infrastructure, DataRepresentation, WorkflowStep, Coverage
BugReports: https://github.com/sa-lee/plyranges
License: Artistic-2.0
Encoding: UTF-8
ByteCompile: true
Suggests: knitr, BiocStyle, rmarkdown, testthat, ggplot2, HelloRanges,
        HelloRangesData, BSgenome.Hsapiens.UCSC.hg19, pasillaBamSubset,
        covr
VignetteBuilder: knitr
Roxygen: list(markdown = TRUE)
RoxygenNote: 6.1.1
Collate: 'class-AnchoredRanges.R' 'class-Operator.R'
        'class-DeferredGenomicRanges.R' 'class-GroupedRanges.R'
        'dplyr-arrange.R' 'dplyr-filter.R' 'dplyr-groups.R'
        'dplyr-mutate.R' 'dplyr-select.R' 'dplyr-summarize.R'
        'endo-coverage.R' 'endo-tile.R' 'io-bam.R' 'io-bed.R'
        'io-bigwig.R' 'io-gff.R' 'io-wig.R'
        'methods-DeferredGenomicRanges.R' 'methods-Operator.R'
        'plyranges.R' 'ranges-anchors.R' 'ranges-arithmetic-flank.R'
        'ranges-arithmetic-setters.R' 'ranges-arithmetic-shift.R'
        'ranges-arithmetic-stretch.R' 'ranges-bind.R' 'ranges-chop.R'
        'ranges-construct.R' 'ranges-disjoin.R' 'ranges-eval-quo.R'
        'ranges-eval.R' 'ranges-genomeinfo.R' 'ranges-join-follow.R'
        'ranges-join-nearest.R' 'ranges-join-precede.R'
        'ranges-overlap-count.R' 'ranges-overlap-filter.R'
        'ranges-overlap-find.R' 'ranges-overlap-groups.R'
        'ranges-overlap-joins-intersect.R'
        'ranges-overlap-joins-outer.R' 'ranges-overlap-self-joins.R'
        'ranges-pairs.R' 'ranges-rangewise-setops.R' 'ranges-reduce.R'
        'ranges-setops.R' 'reexports.R' 'tidyr-unnest.R'
git_url: https://git.bioconductor.org/packages/plyranges
git_branch: RELEASE_3_9
git_last_commit: bfecee4
git_last_commit_date: 2019-07-01
Date/Publication: 2019-07-01
NeedsCompilation: no
Packaged: 2019-07-02 02:44:06 UTC; biocbuild
Author: Stuart Lee [aut, cre],
  Michael Lawrence [aut, ctb],
  Dianne Cook [aut, ctb]
Built: R 3.6.1; ; 2019-08-07 06:01:42 UTC; unix
