{% set version = "1.24.0" %}
{% set name = "pathview" %}
{% set bioc = "3.9" %}

package:
  name: 'bioconductor-{{ name|lower }}'
  version: '{{ version }}'
source:
  url:
    - 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
    - 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
    - 'https://depot.galaxyproject.org/software/bioconductor-{{ name }}/bioconductor-{{ name }}_{{ version }}_src_all.tar.gz'
  md5: 9b6dd193eb8566c7991ca16a95913f45
build:
  number: 1
  rpaths:
    - lib/R/lib/
    - lib/
  noarch: generic
# Suggests: gage, org.Mm.eg.db, RUnit, BiocGenerics
requirements:
  host:
    - 'bioconductor-annotationdbi >=1.46.0,<1.47.0'
    - 'bioconductor-graph >=1.62.0,<1.63.0'
    - 'bioconductor-kegggraph >=1.44.0,<1.45.0'
    - 'bioconductor-keggrest >=1.24.0,<1.25.0'
    - 'bioconductor-org.hs.eg.db >=3.8.0,<3.9.0'
    - 'bioconductor-rgraphviz >=2.28.0,<2.29.0'
    - r-base
    - r-png
    - r-xml
  run:
    - 'bioconductor-annotationdbi >=1.46.0,<1.47.0'
    - 'bioconductor-graph >=1.62.0,<1.63.0'
    - 'bioconductor-kegggraph >=1.44.0,<1.45.0'
    - 'bioconductor-keggrest >=1.24.0,<1.25.0'
    - 'bioconductor-org.hs.eg.db >=3.8.0,<3.9.0'
    - 'bioconductor-rgraphviz >=2.28.0,<2.29.0'
    - r-base
    - r-png
    - r-xml
test:
  commands:
    - '$R -e "library(''{{ name }}'')"'
about:
  home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
  license: 'GPL (>=3.0)'
  summary: 'Pathview is a tool set for pathway based data integration and visualization. It maps and renders a wide variety of biological data on relevant pathway graphs. All users need is to supply their data and specify the target pathway. Pathview automatically downloads the pathway graph data, parses the data file, maps user data to the pathway, and render pathway graph with the mapped data. In addition, Pathview also seamlessly integrates with pathway and gene set (enrichment) analysis tools for large-scale and fully automated analysis.'
extra:
  identifiers:
    - biotools:pathview
  parent_recipe:
    name: bioconductor-pathview
    path: recipes/bioconductor-pathview
    version: 1.20.0

