{% set version = "1.16.0" %}
{% set name = "OGSA" %}
{% set bioc = "3.10" %}

package:
  name: 'bioconductor-{{ name|lower }}'
  version: '{{ version }}'
source:
  url:
    - 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
    - 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
    - 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
  md5: 2fb12f9db88876ec0600d10a8c4ab516
build:
  number: 0
  rpaths:
    - lib/R/lib/
    - lib/
  noarch: generic
requirements:
  host:
    - 'bioconductor-biobase >=2.46.0,<2.47.0'
    - 'bioconductor-limma >=3.42.0,<3.43.0'
    - r-base
    - 'r-gplots >=2.8.0'
  run:
    - 'bioconductor-biobase >=2.46.0,<2.47.0'
    - 'bioconductor-limma >=3.42.0,<3.43.0'
    - r-base
    - 'r-gplots >=2.8.0'
test:
  commands:
    - '$R -e "library(''{{ name }}'')"'
about:
  home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
  license: 'GPL (== 2)'
  summary: 'Outlier Gene Set Analysis'
  description: 'OGSA provides a global estimate of pathway deregulation in cancer subtypes by integrating the estimates of significance for individual pathway members that have been identified by outlier analysis.'
  license_file: '{{ environ["PREFIX"] }}/lib/R/share/licenses/GPL-2'
extra:
  identifiers:
    - biotools:ogsa
    - doi:10.1109/TCBB.2013.153
  parent_recipe:
    name: bioconductor-ogsa
    path: recipes/bioconductor-ogsa
    version: 1.10.0

