ARSyNseq                ASCA Removal of Systematic Noise on Seq data
Biodetection            Biodetection class
CD                      CD class
CountsBio               CountsBio class
DE.plot                 Plotting differential expression results
GCbias                  GCbias class
Output                  Output class of NOISeq
PCA                     PCA class
PCA.GENES               Principal Component Analysis
QCreport                Quality Control report for expression data
Saturation              Saturation class
dat                     Exploration of expression data.
dat2save                Saving data generated for exploratory plots.
degenes                 Recovering differencially expressed features.
explo.plot              Exploratory plots for expression data.
filtered.data           Methods to filter out low count features
lengthbias              lengthbias class
myCounts                Class myCounts
mybiotypes              Marioni's dataset
mydata                  Example of objects used and created by the
                        NOISeq package
noiseq                  Differential expression method for technical
                        replicates or no replicates at all
noiseqbio               Differential expression method for biological
                        replicates
readData                Creating an object of eSet class
uqua                    Normalization methods
