# This file created by conda-build 3.24.0
# meta.yaml template originally from:
# /opt/recipe, last modified Thu Dec  7 15:45:46 2023
# ------------------------------------------------

package:
  name: bioconductor-ngsreports
  version: 2.4.0
source:
  md5: c2d8c1f7a1869275420e05125fb1b420
  url:
    - https://bioarchive.galaxyproject.org/ngsReports_2.4.0.tar.gz
    - https://bioconductor.org/packages/3.18/bioc/src/contrib/Archive/ngsReports/ngsReports_2.4.0.tar.gz
    - https://bioconductor.org/packages/3.18/bioc/src/contrib/ngsReports_2.4.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-ngsreports/bioconductor-ngsreports_2.4.0_src_all.tar.gz
build:
  noarch: generic
  number: '0'
  rpaths:
    - lib/
    - lib/R/lib/
  run_exports: bioconductor-ngsreports >=2.4.0,<2.5.0a0
  string: r43hdfd78af_0
requirements:
  host:
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    - _openmp_mutex 4.5 2_gnu
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    - bioconductor-data-packages 20231203 hdfd78af_0
    - bioconductor-genomeinfodb 1.38.1 r43hdfd78af_1
    - bioconductor-genomeinfodbdata 1.2.11 r43hdfd78af_1
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    - gcc_impl_linux-64 13.2.0 h338b0a0_3
    - gettext 0.21.1 h27087fc_0
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    - gmp 6.3.0 h59595ed_0
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    - libcurl 8.5.0 hca28451_0
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    - make 4.3 hd18ef5c_1
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    - pip 23.3.1 pyhd8ed1ab_0
    - pixman 0.42.2 h59595ed_0
    - pthread-stubs 0.4 h36c2ea0_1001
    - python 3.12.0 hab00c5b_0_cpython
    - python_abi 3.12 4_cp312
    - pyyaml 6.0.1 py312h98912ed_1
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    - r-base 4.3.2 hb8ee39d_1
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    - r-evaluate 0.23 r43hc72bb7e_0
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    - r-hms 1.1.3 r43hc72bb7e_1
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    - r-httr 1.4.7 r43hc72bb7e_0
    - r-isoband 0.2.7 r43ha503ecb_2
    - r-jquerylib 0.1.4 r43hc72bb7e_2
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    - r-lattice 0.22_5 r43h57805ef_0
    - r-lazyeval 0.2.2 r43h57805ef_4
    - r-lifecycle 1.0.4 r43hc72bb7e_0
    - r-lubridate 1.9.3 r43h57805ef_0
    - r-magrittr 2.0.3 r43h57805ef_2
    - r-mass 7.3_60 r43h57805ef_1
    - r-matrix 1.6_4 r43h316c678_0
    - r-memoise 2.0.1 r43hc72bb7e_2
    - r-mgcv 1.9_0 r43h316c678_0
    - r-mime 0.12 r43h57805ef_2
    - r-munsell 0.5.0 r43hc72bb7e_1006
    - r-nlme 3.1_164 r43h61816a4_0
    - r-openssl 2.1.1 r43hb353fa6_0
    - r-pander 0.6.5 r43ha503ecb_2
    - r-patchwork 1.1.3 r43hc72bb7e_0
    - r-pillar 1.9.0 r43hc72bb7e_1
    - r-pkgconfig 2.0.3 r43hc72bb7e_3
    - r-plotly 4.10.3 r43hc72bb7e_0
    - r-plyr 1.8.9 r43ha503ecb_0
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    - r-rcolorbrewer 1.1_3 r43h785f33e_2
    - r-rcpp 1.0.11 r43h7df8631_0
    - r-rcurl 1.98_1.13 r43hf9611b0_0
    - r-readr 2.1.4 r43ha503ecb_1
    - r-reshape2 1.4.4 r43ha503ecb_3
    - r-rlang 1.1.2 r43ha503ecb_0
    - r-rmarkdown 2.25 r43hc72bb7e_0
    - r-sass 0.4.8 r43ha503ecb_0
    - r-scales 1.3.0 r43hc72bb7e_0
    - r-stringi 1.8.2 r43h9facbd6_0
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    - r-sys 3.4.2 r43h57805ef_1
    - r-tibble 3.2.1 r43h57805ef_2
    - r-tidyr 1.3.0 r43ha503ecb_1
    - r-tidyselect 1.2.0 r43hc72bb7e_1
    - r-timechange 0.2.0 r43ha503ecb_1
    - r-tinytex 0.49 r43hc72bb7e_0
    - r-tzdb 0.4.0 r43ha503ecb_1
    - r-utf8 1.2.4 r43h57805ef_0
    - r-vctrs 0.6.5 r43ha503ecb_0
    - r-viridislite 0.4.2 r43hc72bb7e_1
    - r-vroom 1.6.5 r43ha503ecb_0
    - r-withr 2.5.2 r43hc72bb7e_0
    - r-xfun 0.41 r43ha503ecb_0
    - r-yaml 2.3.7 r43h57805ef_1
    - r-zoo 1.8_12 r43h57805ef_1
    - readline 8.2 h8228510_1
    - sed 4.8 he412f7d_0
    - setuptools 68.2.2 pyhd8ed1ab_0
    - sysroot_linux-64 2.12 he073ed8_16
    - tk 8.6.13 noxft_h4845f30_101
    - tktable 2.10 h0c5db8f_5
    - toml 0.10.2 pyhd8ed1ab_0
    - tomlkit 0.12.3 pyha770c72_0
    - tzdata 2023c h71feb2d_0
    - wheel 0.42.0 pyhd8ed1ab_0
    - xmltodict 0.13.0 pyhd8ed1ab_0
    - xorg-kbproto 1.0.7 h7f98852_1002
    - xorg-libice 1.1.1 hd590300_0
    - xorg-libsm 1.2.4 h7391055_0
    - xorg-libx11 1.8.7 h8ee46fc_0
    - xorg-libxau 1.0.11 hd590300_0
    - xorg-libxdmcp 1.1.3 h7f98852_0
    - xorg-libxext 1.3.4 h0b41bf4_2
    - xorg-libxrender 0.9.11 hd590300_0
    - xorg-libxt 1.3.0 hd590300_1
    - xorg-renderproto 0.11.1 h7f98852_1002
    - xorg-xextproto 7.3.0 h0b41bf4_1003
    - xorg-xproto 7.0.31 h7f98852_1007
    - xz 5.2.6 h166bdaf_0
    - yaml 0.2.5 h7f98852_2
    - yq 3.2.3 pyhd8ed1ab_0
    - zlib 1.2.13 hd590300_5
    - zstd 1.5.5 hfc55251_0
  run:
    - bioconductor-biocgenerics >=0.48.0,<0.49.0
    - bioconductor-biostrings >=2.70.0,<2.71.0
    - r-base >=4.3,<4.4.0a0
    - r-checkmate
    - r-dplyr >=1.1.0
    - r-dt
    - r-forcats
    - r-ggdendro
    - r-ggplot2 >=3.4.0
    - r-jsonlite
    - r-lifecycle
    - r-lubridate
    - r-pander
    - r-patchwork >=1.1.1
    - r-plotly >=4.9.4
    - r-readr
    - r-reshape2
    - r-rlang
    - r-rmarkdown
    - r-scales
    - r-stringr
    - r-tibble >=1.3.1
    - r-tidyr
    - r-tidyselect >=0.2.3
    - r-zoo
test:
  commands:
    - $R -e "library('ngsReports')"
about:
  description: This package provides methods and object classes for parsing FastQC
    reports and output summaries from other NGS tools into R. As well as parsing files,
    multiple plotting methods have been implemented for visualising the parsed data.
    Plots can be generated as static ggplot objects or interactive plotly objects.
  home: https://bioconductor.org/packages/3.18/bioc/html/ngsReports.html
  license: file LICENSE
  license_file: LICENSE
  summary: Load FastqQC reports and other NGS related files
extra:
  copy_test_source_files: true
  final: true
