MutationalPatterns-package	MutationalPatterns-package
binomial_test	binomial_test
cluster_signatures	cluster_signatures
cos_sim	cos_sim
cos_sim_matrix	cos_sim_matrix
enrichment_depletion_test	enrichment_depletion_test
explained_by_signatures	explained_by_signatures
extract_signatures	extract_signatures
fit_to_signatures	fit_to_signatures
genomic_distribution	genomic_distribution
MutationalPatterns	MutationalPatterns-package
mutations_from_vcf	mutations_from_vcf
mutation_context	mutation_context
mutation_types	mutation_types
mut_context	mut_context
mut_matrix	mut_matrix
mut_matrix_stranded	mut_matrix_stranded
mut_strand	mut_strand
mut_type	mut_type
mut_type_occurrences	mut_type_occurrences
plot_192_profile	plot_192_profile
plot_96_profile	plot_96_profile
plot_compare_profiles	plot_compare_profiles
plot_contribution	plot_contribution
plot_contribution_heatmap	plot_contribution_heatmap
plot_cosine_heatmap	plot_cosine_heatmap
plot_enrichment_depletion	plot_enrichment_depletion
plot_rainfall	plot_rainfall
plot_signature_strand_bias	plot_signature_strand_bias
plot_spectrum	plot_spectrum
plot_strand	plot_strand
plot_strand_bias	plot_strand_bias
read_vcfs_as_granges	read_vcfs_as_granges
strand_bias_test	strand_bias_test
strand_from_vcf	strand_from_vcf
strand_occurrences	strand_occurrences
type_context	type_context
