# Multi-omics Classification, Functional Enrichment and Network Inference analysis

## Documentation for package ‘multiSight’ version 1.0.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

assessPerformance_Biosigner | MLmodels biosigner function
assessPerformance_Diablo | MLmodels diablo function
biosignerRes | Biosigner results
buildFeatTable | Models util function
convertToEntrezid | Understand utils function
correlationNetworkInference | Correlation network inference
deseqRes | multiSight results
diabloRes | Diablo results
enrichResList | multiSight results
enrichWP | Util function From clusterProfiler
getDataSelectedFeatures | Select only data values from diablo features selected.
mod_hypothesisGenerator_server | hypothesisGenerator Server Function
mod_understand_server | understand Server Function
mod_understand_ui | understand UI Function
mod_user_input_server | user_input Server Function
mutualInformationNI | Mutual Information network inference
omic2 | Multi-omic data with 2 omics.
partialCorrelationNI | Partial Correlation network inference
pubmedInsight | Select only data values from diablo features selected.
runFeatureNumberTuning | diablo util function
runMultiDeseqAnalysis | Enrichment function
runMultiEnrichment | Main understand module function
runMultiEnrichment_result | multiSight results
runSPLSDA | MLmodels diablo function
runSVMRFmodels_Biosigner | MLmodels biosigner function
run_app | Run the Shiny Application
splitDatatoTrainTest | MLmodels util function
stoufferTable | Stouffer's p-value computing with all pvalues from all enrichment tables provided and all gene sets to build enrichment maps.