Package: MultiBaC
Type: Package
Title: Multiomic Batch effect Correction
Authors@R: c(person("Manuel", "Ugidos",role = c("aut", "cre"), email = "manuelugidos@gmail.com"), person("Sonia", "Tarazona", role = c("aut")), person("María José", "Nueda", role = c("aut")))
Version: 1.10.0
Author: person("Manuel", "Ugidos", email = "manuelugidos@gmail.com"), person("Sonia", "Tarazona", email = "sotacam@gmail.com"), person("María José", "Nueda", email = "mjnueda@ua.es")
Maintainer: The package maintainer <manuelugidos@gmail.com>
Description: MultiBaC is a strategy to correct batch effects from multiomic datasets distributed across different labs or data acquisition events. MultiBaC is the first Batch effect correction algorithm that dealing with batch effect correction in multiomics datasets. MultiBaC is able to remove batch effects across different omics generated within separate batches provided that at least one common omic data type is included in all the batches considered.
License: GPL-3
Encoding: UTF-8
biocViews: Software, StatisticalMethod, PrincipalComponent,
        DataRepresentation, GeneExpression, Transcription, BatchEffect
Imports: Matrix, ggplot2, MultiAssayExperiment, ropls, graphics,
        methods, plotrix, grDevices, pcaMethods
Suggests: knitr, rmarkdown, BiocStyle, devtools
VignetteBuilder: knitr
Collate: 'auxfunctions.R' 'ARSyNcomponents.R' 'ASCA1f.R' 'PCA-GENES.R'
        'ASCAfunres.R' 'ASCAfun12.R' 'ASCAfun1.R' 'ASCA2f.R'
        'ARSyNbac.R' 'MultiBaC.R' 'createMbac.R' 'plot-methods.R'
        'summary-function.R'
NeedsCompilation: no
RoxygenNote: 7.1.1
git_url: https://git.bioconductor.org/packages/MultiBaC
git_branch: RELEASE_3_17
git_last_commit: c3c7fe3
git_last_commit_date: 2023-04-25
Date/Publication: 2023-04-25
Packaged: 2023-04-25 21:52:17 UTC; biocbuild
Built: R 4.3.1; ; 2023-07-17 23:30:40 UTC; unix
