annotation.mine	annotation.mine
annotation.mq	annotation.mq
annotation.pd	annotation.pd
dataProcessPlotsTMT	dataProcessPlotsTMT
evidence	evidence
groupComparisonTMT	groupComparisonTMT
input.pd	input.pd
MaxQtoMSstatsTMTFormat	MaxQtoMSstatsTMTFormat
MSstatsTMT	MSstatsTMT
OpenMStoMSstatsTMTFormat	OpenMStoMSstatsTMTFormat
PDtoMSstatsTMTFormat	PDtoMSstatsTMTFormat
proteinGroups	proteinGroups
proteinSummarization	proteinSummarization
quant.pd.msstats	quant.pd.msstats
raw.mine	raw.mine
raw.om	raw.om
raw.pd	raw.pd
SpectroMinetoMSstatsTMTFormat	SpectroMinetoMSstatsTMTFormat
test.pairwise	test.pairwise
