# This file created by conda-build 3.24.0
# meta.yaml template originally from:
# /opt/recipe, last modified Thu Dec  7 09:42:51 2023
# ------------------------------------------------

package:
  name: bioconductor-msexperiment
  version: 1.4.0
source:
  md5: b248141f2ad9d5421d067b7f90a4c87e
  url:
    - https://bioarchive.galaxyproject.org/MsExperiment_1.4.0.tar.gz
    - https://bioconductor.org/packages/3.18/bioc/src/contrib/Archive/MsExperiment/MsExperiment_1.4.0.tar.gz
    - https://bioconductor.org/packages/3.18/bioc/src/contrib/MsExperiment_1.4.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-msexperiment/bioconductor-msexperiment_1.4.0_src_all.tar.gz
build:
  noarch: generic
  number: '0'
  rpaths:
    - lib/
    - lib/R/lib/
  run_exports: bioconductor-msexperiment >=1.4.0,<1.5.0a0
  string: r43hdfd78af_0
requirements:
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - _r-mutex 1.0.1 anacondar_1
    - argcomplete 3.1.6 pyhd8ed1ab_0
    - binutils_impl_linux-64 2.40 hf600244_0
    - bioconductor-annotationfilter 1.26.0 r43hdfd78af_0
    - bioconductor-biobase 2.62.0 r43ha9d7317_1
    - bioconductor-biocbaseutils 1.4.0 r43hdfd78af_0
    - bioconductor-biocgenerics 0.48.1 r43hdfd78af_2
    - bioconductor-biocparallel 1.36.0 r43hf17093f_1
    - bioconductor-data-packages 20231203 hdfd78af_0
    - bioconductor-delayedarray 0.28.0 r43ha9d7317_1
    - bioconductor-genomeinfodb 1.38.1 r43hdfd78af_1
    - bioconductor-genomeinfodbdata 1.2.11 r43hdfd78af_1
    - bioconductor-genomicranges 1.54.1 r43ha9d7317_1
    - bioconductor-iranges 2.36.0 r43ha9d7317_1
    - bioconductor-matrixgenerics 1.14.0 r43hdfd78af_1
    - bioconductor-metabocoreutils 1.10.0 r43hdfd78af_0
    - bioconductor-mscoreutils 1.14.1 r43hf17093f_0
    - bioconductor-multiassayexperiment 1.28.0 r43hdfd78af_0
    - bioconductor-protgenerics 1.34.0 r43hdfd78af_0
    - bioconductor-qfeatures 1.12.0 r43hdfd78af_0
    - bioconductor-s4arrays 1.2.0 r43ha9d7317_1
    - bioconductor-s4vectors 0.40.2 r43ha9d7317_1
    - bioconductor-sparsearray 1.2.2 r43ha9d7317_1
    - bioconductor-spectra 1.12.0 r43hdfd78af_0
    - bioconductor-summarizedexperiment 1.32.0 r43hdfd78af_0
    - bioconductor-xvector 0.42.0 r43ha9d7317_1
    - bioconductor-zlibbioc 1.48.0 r43ha9d7317_1
    - bwidget 1.9.14 ha770c72_1
    - bzip2 1.0.8 hd590300_5
    - c-ares 1.23.0 hd590300_0
    - ca-certificates 2023.11.17 hbcca054_0
    - cairo 1.18.0 h3faef2a_0
    - curl 8.5.0 hca28451_0
    - expat 2.5.0 hcb278e6_1
    - font-ttf-dejavu-sans-mono 2.37 hab24e00_0
    - font-ttf-inconsolata 3.000 h77eed37_0
    - font-ttf-source-code-pro 2.038 h77eed37_0
    - font-ttf-ubuntu 0.83 h77eed37_1
    - fontconfig 2.14.2 h14ed4e7_0
    - fonts-conda-ecosystem 1 0
    - fonts-conda-forge 1 0
    - freetype 2.12.1 h267a509_2
    - fribidi 1.0.10 h36c2ea0_0
    - gcc_impl_linux-64 13.2.0 h338b0a0_3
    - gettext 0.21.1 h27087fc_0
    - gfortran_impl_linux-64 13.2.0 h76e1118_3
    - glpk 5.0 h445213a_0
    - gmp 6.3.0 h59595ed_0
    - graphite2 1.3.13 h58526e2_1001
    - gxx_impl_linux-64 13.2.0 h338b0a0_3
    - harfbuzz 8.3.0 h3d44ed6_0
    - icu 73.2 h59595ed_0
    - jq 1.7 hd590300_0
    - kernel-headers_linux-64 2.6.32 he073ed8_16
    - keyutils 1.6.1 h166bdaf_0
    - krb5 1.21.2 h659d440_0
    - ld_impl_linux-64 2.40 h41732ed_0
    - lerc 4.0.0 h27087fc_0
    - libblas 3.9.0 20_linux64_openblas
    - libcurl 8.5.0 hca28451_0
    - libdeflate 1.19 hd590300_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 h516909a_1
    - libexpat 2.5.0 hcb278e6_1
    - libffi 3.4.2 h7f98852_5
    - libgcc-devel_linux-64 13.2.0 ha9c7c90_103
    - libgcc-ng 13.2.0 h807b86a_3
    - libgfortran-ng 13.2.0 h69a702a_3
    - libgfortran5 13.2.0 ha4646dd_3
    - libglib 2.78.2 h783c2da_0
    - libgomp 13.2.0 h807b86a_3
    - libiconv 1.17 h166bdaf_0
    - libjpeg-turbo 3.0.0 hd590300_1
    - liblapack 3.9.0 20_linux64_openblas
    - libnghttp2 1.58.0 h47da74e_0
    - libnsl 2.0.1 hd590300_0
    - libopenblas 0.3.25 pthreads_h413a1c8_0
    - libpng 1.6.39 h753d276_0
    - libsanitizer 13.2.0 h7e041cc_3
    - libsqlite 3.44.2 h2797004_0
    - libssh2 1.11.0 h0841786_0
    - libstdcxx-devel_linux-64 13.2.0 ha9c7c90_103
    - libstdcxx-ng 13.2.0 h7e041cc_3
    - libtiff 4.6.0 ha9c0a0a_2
    - libuuid 2.38.1 h0b41bf4_0
    - libwebp-base 1.3.2 hd590300_0
    - libxcb 1.15 h0b41bf4_0
    - libxml2 2.11.6 h232c23b_0
    - libzlib 1.2.13 hd590300_5
    - make 4.3 hd18ef5c_1
    - ncurses 6.4 h59595ed_2
    - oniguruma 6.9.9 hd590300_0
    - openssl 3.2.0 hd590300_1
    - pandoc 3.1.3 h32600fe_0
    - pango 1.50.14 ha41ecd1_2
    - pcre2 10.42 hcad00b1_0
    - pip 23.3.1 pyhd8ed1ab_0
    - pixman 0.42.2 h59595ed_0
    - pthread-stubs 0.4 h36c2ea0_1001
    - python 3.12.0 hab00c5b_0_cpython
    - python_abi 3.12 4_cp312
    - pyyaml 6.0.1 py312h98912ed_1
    - r-abind 1.4_5 r43hc72bb7e_1005
    - r-askpass 1.2.0 r43h57805ef_0
    - r-base 4.3.2 hb8ee39d_1
    - r-base64enc 0.1_3 r43h57805ef_1006
    - r-bh 1.81.0_1 r43hc72bb7e_1
    - r-bitops 1.0_7 r43h57805ef_2
    - r-bslib 0.6.1 r43hc72bb7e_0
    - r-cachem 1.0.8 r43h57805ef_1
    - r-cli 3.6.1 r43ha503ecb_1
    - r-clue 0.3_65 r43h57805ef_0
    - r-cluster 2.1.6 r43h61816a4_0
    - r-codetools 0.2_19 r43hc72bb7e_1
    - r-colorspace 2.1_0 r43h57805ef_1
    - r-cpp11 0.4.7 r43hc72bb7e_0
    - r-crayon 1.5.2 r43hc72bb7e_2
    - r-crosstalk 1.2.1 r43hc72bb7e_0
    - r-curl 5.1.0 r43hf9611b0_0
    - r-data.table 1.14.8 r43h029312a_2
    - r-digest 0.6.33 r43ha503ecb_0
    - r-dplyr 1.1.4 r43ha503ecb_0
    - r-ellipsis 0.3.2 r43h57805ef_2
    - r-evaluate 0.23 r43hc72bb7e_0
    - r-fansi 1.0.5 r43h57805ef_0
    - r-farver 2.1.1 r43ha503ecb_2
    - r-fastmap 1.1.1 r43ha503ecb_1
    - r-fontawesome 0.5.2 r43hc72bb7e_0
    - r-formatr 1.14 r43hc72bb7e_1
    - r-fs 1.6.3 r43ha503ecb_0
    - r-futile.logger 1.4.3 r43hc72bb7e_1005
    - r-futile.options 1.0.1 r43hc72bb7e_1004
    - r-generics 0.1.3 r43hc72bb7e_2
    - r-ggplot2 3.4.4 r43hc72bb7e_0
    - r-glue 1.6.2 r43h57805ef_2
    - r-gtable 0.3.4 r43hc72bb7e_0
    - r-hexbin 1.28.3 r43h61816a4_1
    - r-highr 0.10 r43hc72bb7e_1
    - r-htmltools 0.5.7 r43ha503ecb_0
    - r-htmlwidgets 1.6.4 r43hc72bb7e_0
    - r-httr 1.4.7 r43hc72bb7e_0
    - r-igraph 1.5.1 r43hbd8eb98_0
    - r-isoband 0.2.7 r43ha503ecb_2
    - r-jquerylib 0.1.4 r43hc72bb7e_2
    - r-jsonlite 1.8.8 r43h57805ef_0
    - r-knitr 1.45 r43hc72bb7e_0
    - r-labeling 0.4.3 r43hc72bb7e_0
    - r-lambda.r 1.2.4 r43hc72bb7e_3
    - r-later 1.3.2 r43ha503ecb_0
    - r-lattice 0.22_5 r43h57805ef_0
    - r-lazyeval 0.2.2 r43h57805ef_4
    - r-lifecycle 1.0.4 r43hc72bb7e_0
    - r-magrittr 2.0.3 r43h57805ef_2
    - r-mass 7.3_60 r43h57805ef_1
    - r-matrix 1.6_4 r43h316c678_0
    - r-matrixstats 1.1.0 r43h57805ef_0
    - r-memoise 2.0.1 r43hc72bb7e_2
    - r-mgcv 1.9_0 r43h316c678_0
    - r-mime 0.12 r43h57805ef_2
    - r-munsell 0.5.0 r43hc72bb7e_1006
    - r-nlme 3.1_164 r43h61816a4_0
    - r-openssl 2.1.1 r43hb353fa6_0
    - r-pillar 1.9.0 r43hc72bb7e_1
    - r-pkgconfig 2.0.3 r43hc72bb7e_3
    - r-plotly 4.10.3 r43hc72bb7e_0
    - r-promises 1.2.1 r43ha503ecb_0
    - r-purrr 1.0.2 r43h57805ef_0
    - r-r6 2.5.1 r43hc72bb7e_2
    - r-rappdirs 0.3.3 r43h57805ef_2
    - r-rcolorbrewer 1.1_3 r43h785f33e_2
    - r-rcpp 1.0.11 r43h7df8631_0
    - r-rcurl 1.98_1.13 r43hf9611b0_0
    - r-rlang 1.1.2 r43ha503ecb_0
    - r-rmarkdown 2.25 r43hc72bb7e_0
    - r-sass 0.4.8 r43ha503ecb_0
    - r-scales 1.3.0 r43hc72bb7e_0
    - r-snow 0.4_4 r43hc72bb7e_2
    - r-stringi 1.8.2 r43h9facbd6_0
    - r-stringr 1.5.1 r43h785f33e_0
    - r-sys 3.4.2 r43h57805ef_1
    - r-tibble 3.2.1 r43h57805ef_2
    - r-tidyr 1.3.0 r43ha503ecb_1
    - r-tidyselect 1.2.0 r43hc72bb7e_1
    - r-tinytex 0.49 r43hc72bb7e_0
    - r-utf8 1.2.4 r43h57805ef_0
    - r-vctrs 0.6.5 r43ha503ecb_0
    - r-viridislite 0.4.2 r43hc72bb7e_1
    - r-withr 2.5.2 r43hc72bb7e_0
    - r-xfun 0.41 r43ha503ecb_0
    - r-yaml 2.3.7 r43h57805ef_1
    - readline 8.2 h8228510_1
    - sed 4.8 he412f7d_0
    - setuptools 68.2.2 pyhd8ed1ab_0
    - sysroot_linux-64 2.12 he073ed8_16
    - tk 8.6.13 noxft_h4845f30_101
    - tktable 2.10 h0c5db8f_5
    - toml 0.10.2 pyhd8ed1ab_0
    - tomlkit 0.12.3 pyha770c72_0
    - tzdata 2023c h71feb2d_0
    - wheel 0.42.0 pyhd8ed1ab_0
    - xmltodict 0.13.0 pyhd8ed1ab_0
    - xorg-kbproto 1.0.7 h7f98852_1002
    - xorg-libice 1.1.1 hd590300_0
    - xorg-libsm 1.2.4 h7391055_0
    - xorg-libx11 1.8.7 h8ee46fc_0
    - xorg-libxau 1.0.11 hd590300_0
    - xorg-libxdmcp 1.1.3 h7f98852_0
    - xorg-libxext 1.3.4 h0b41bf4_2
    - xorg-libxrender 0.9.11 hd590300_0
    - xorg-libxt 1.3.0 hd590300_1
    - xorg-renderproto 0.11.1 h7f98852_1002
    - xorg-xextproto 7.3.0 h0b41bf4_1003
    - xorg-xproto 7.0.31 h7f98852_1007
    - xz 5.2.6 h166bdaf_0
    - yaml 0.2.5 h7f98852_2
    - yq 3.2.3 pyhd8ed1ab_0
    - zlib 1.2.13 hd590300_5
    - zstd 1.5.5 hfc55251_0
  run:
    - bioconductor-iranges >=2.36.0,<2.37.0
    - bioconductor-protgenerics >=1.34.0,<1.35.0
    - bioconductor-qfeatures >=1.12.0,<1.13.0
    - bioconductor-s4vectors >=0.40.0,<0.41.0
    - bioconductor-spectra >=1.12.0,<1.13.0
    - bioconductor-summarizedexperiment >=1.32.0,<1.33.0
    - r-base >=4.3,<4.4.0a0
test:
  commands:
    - $R -e "library('MsExperiment')"
about:
  description: Infrastructure to store and manage all aspects related to a complete
    proteomics or metabolomics mass spectrometry (MS) experiment. The MsExperiment
    package provides light-weight and flexible containers for MS experiments building
    on the new MS infrastructure provided by the Spectra, QFeatures and related packages.
    Along with raw data representations, links to original data files and sample annotations,
    additional metadata or annotations can also be stored within the MsExperiment
    container. To guarantee maximum flexibility only minimal constraints are put on
    the type and content of the data within the containers.
  home: https://bioconductor.org/packages/3.18/bioc/html/MsExperiment.html
  license: Artistic-2.0
  summary: Infrastructure for Mass Spectrometry Experiments
extra:
  copy_test_source_files: true
  final: true
