generateReport	generateReport
make_MQCombined	make_MQCombined
MaxQuantAnalysisInfo	MaxQuantAnalysisInfo
PlotAcquisitionCycle	PlotAcquisitionCycle
PlotAllDynamicRange	PlotAllDynamicRange
PlotAndromedaScore	PlotAndromedaScore
PlotCharge	PlotCharge
PlotCombinedDynamicRange	PlotCombinedDynamicRange
PlotHydrophobicity	PlotHydrophobicity
PlotIntensity	PlotIntensity
PlotiRT	PlotiRT
PlotiRTScore	PlotiRTScore
PlotIsotopePattern	PlotIsotopePattern
PlotMsMs	PlotMsMs
PlotPCA	PlotPCA
PlotPeaks	PlotPeaks
PlotPeptidesIdentified	PlotPeptidesIdentified
PlotProteaseSpecificity	PlotProteaseSpecificity
PlotProteinCoverage	PlotProteinCoverage
PlotProteinOverlap	PlotProteinOverlap
PlotProteinPeptideRatio	PlotProteinPeptideRatio
PlotProteinsIdentified	PlotProteinsIdentified
PlotPTM	PlotPTM
PlotPTMAcrossSamples	PlotPTMAcrossSamples
PlotTotalIonCurrent	PlotTotalIonCurrent
ReportTables	ReportTables
