GIS                     calculate gene influential scores of genes in a
                        gene set.
NCI60_4array_supdata    supp data for Microarray gene expression
                        profiles of the NCI 60 cell lines from 4
                        different platforms
NCI60_4arrays           Microarray gene expression profiles of the NCI
                        60 cell lines from 4 different platforms
annotate.gs             Summary annotation information of a gene set
biSoftK                 NIPALS algorithm with soft thresholding
                        operator on rows and columns
bootMbpca               Bootstrap mbpca to estimate the coherence of
                        different data sets
bootMbpcaK              An internal function called by 'bootMbpca'.
bootMoa                 Significant components in "moa" returned by
                        function "moa".
box.gs.feature          boxplot of gene set variables across all
                        samples.
combine-methods         Combine two objects of class 'mgsa' into one.
decompose.gs.group      Data-wise or PC-wise decomposition of gene set
                        scores for all observations.
decompose.gs.ind        Data-wise or PC-wise decomposition of gene set
                        scores for a single observation.
deflat                  deflat function used by 'mbpca'
distMoa                 Calculate the distance matrix from an object of
                        class 'moa-class'.
getmgsa                 get values in an object of class "mgsa".
matpower                compute the power of a matrix
mbpca                   Extension of PCA to analyze multiple data sets
mgsa-class              Class '"mgsa"'
moGap                   Gap statistic for clustering latent variables
                        in 'moa-class'.
moa                     Multiple omics data analysis using MFA or
                        STATIS
moa-class               Class '"moa"'
moa.sup-class           Class '"moa.sup"'
moaCoef                 Extract the loadings/coefficients from an
                        object of class 'moa-class'.
moaScore                Extract global scores from an object of class
                        'moa-class'.
mogsa                   multiple omics data integration and gene set
                        analysis
mogsa-package           Multiple omics clustering and gene set analysis
msvd                    SVD based algorithm to calculate block Score
                        and global scores for 'mbpca'.
nipalsSoftK             NIPALS algorithm with soft thresholding
                        operator
pairwise.rv             pairwise RV coefficients.
plot-methods            Methods for function 'plot'
plotGS                  Plot the gene set space
prepGraphite            Prepare pathway gene sets from graphite package
prepMsigDB              Conver gmt format file to a list
prepSupMoa              Prepare sumpplementary tables for projection by
                        sup.moa or mogsa.
print-methods           Methods for function 'print'
processOpt              preprocessing of input data in 'mbpca'.
show-methods            Methods for function 'show'
softK                   Soft-thresholding operator
summary-methods         Methods for function 'summary'
sup.moa                 Projecting supplementary tables on object of
                        class 'moa-class'.
toMoa                   convert 'mbpca' result to 'moa-class'
wsvd                    Weighted singular value decomposition (SVD)
