Package: MLSeq
Type: Package
Title: Machine Learning Interface for RNA-Seq Data
Version: 2.2.1
Date: 2019-05-04
Authors@R: c(person("Gokmen", "Zararsiz", role = c("aut", "cre"), email = "gokmenzararsiz@hotmail.com"),
  person("Dincer", "Goksuluk", role = "aut"),
  person("Selcuk", "Korkmaz", role = "aut"),
  person("Vahap", "Eldem", role = "aut"),
  person(c("Izzet", "Parug"), "Duru", role = "ctb"),
  person("Ahmet", "Ozturk", role = "aut"),
  person(c("Ahmet", "Ergun"), "Karaagaoglu", role = c("aut", "ths")))
Depends: caret, ggplot2
VignetteBuilder: knitr
Suggests: knitr, testthat, BiocStyle, VennDiagram, pamr
Imports: methods, DESeq2, edgeR, limma, Biobase, SummarizedExperiment,
        plyr, foreach, utils, sSeq, xtable
biocViews: ImmunoOncology, Sequencing, RNASeq, Classification,
        Clustering
Description: This package applies several machine learning methods, including SVM, bagSVM, Random Forest and CART to RNA-Seq data.
License: GPL(>=2)
NeedsCompilation: no
Encoding: UTF-8
RoxygenNote: 6.1.1
Collate: 'all_classes.R' 'all_generics.R' 'voomFunctions.R'
        'classify.R' 'helper_functions.R' 'predict.R' 'methods.R'
        'onAttach.R' 'package_and_suppl.R' 'plda_nblda_functions.R'
git_url: https://git.bioconductor.org/packages/MLSeq
git_branch: RELEASE_3_9
git_last_commit: aa3088b
git_last_commit_date: 2019-05-04
Date/Publication: 2019-05-04
Packaged: 2019-05-05 00:49:57 UTC; biocbuild
Author: Gokmen Zararsiz [aut, cre],
  Dincer Goksuluk [aut],
  Selcuk Korkmaz [aut],
  Vahap Eldem [aut],
  Izzet Parug Duru [ctb],
  Ahmet Ozturk [aut],
  Ahmet Ergun Karaagaoglu [aut, ths]
Maintainer: Gokmen Zararsiz <gokmenzararsiz@hotmail.com>
Built: R 3.6.1; ; 2019-08-08 12:47:45 UTC; unix
