Package: MLSeq
Type: Package
Title: Machine Learning Interface for RNA-Seq Data
Version: 2.0.0
Date: 2018-06-07
Author: Gokmen Zararsiz, Dincer Goksuluk, Selcuk Korkmaz, Vahap Eldem, Izzet Parug Duru, Ahmet Ozturk, Ahmet Ergun Karaagaoglu
Maintainer: Gokmen Zararsiz <gokmenzararsiz@hotmail.com>
Depends: caret, ggplot2
VignetteBuilder: knitr
Suggests: knitr, testthat, BiocStyle, VennDiagram, pamr
Imports: methods, DESeq2, edgeR, limma, Biobase, SummarizedExperiment,
        plyr, foreach, utils, sSeq, xtable
biocViews: Sequencing, RNASeq, Classification, Clustering
Description: This package applies several machine learning methods, including SVM, bagSVM, Random Forest and CART to RNA-Seq data.
License: GPL(>=2)
NeedsCompilation: no
RoxygenNote: 6.0.1
Collate: 'all_classes.R' 'all_generics.R' 'voomFunctions.R'
        'classify.R' 'helper_functions.R' 'predict.R' 'methods.R'
        'onAttach.R' 'package_and_suppl.R' 'plda_nblda_functions.R'
git_url: https://git.bioconductor.org/packages/MLSeq
git_branch: RELEASE_3_8
git_last_commit: 45a9624
git_last_commit_date: 2018-10-30
Date/Publication: 2018-10-30
Packaged: 2018-10-31 00:08:25 UTC; biocbuild
Built: R 3.5.1; ; 2019-01-01 16:47:16 UTC; unix
