methylInheritance-package	methylInheritance-package
calculateSignificantLevel	calculateSignificantLevel
createDataStructure	createDataStructure
createOutputDir	createOutputDir
demoForTransgenerationalAnalysis	demoForTransgenerationalAnalysis
extractInfo	extractInfo
formatInputMethylData	formatInputMethylData
getGRangesFromMethylDiff	getGRangesFromMethylDiff
interGeneration	interGeneration
isInterGenerationResults	isInterGenerationResults
loadAllRDSResults	loadAllRDSResults
loadConvergenceData	loadConvergenceData
mergePermutationAndObservation	mergePermutationAndObservation
methylInheritance	methylInheritance-package
methylInheritanceResults	methylInheritanceResults
plotConvergenceGraph	plotConvergenceGraph
plotGraph	plotGraph
print.methylInheritanceAllResults	methylInheritanceAllResults
readInterGenerationResults	readInterGenerationResults
runObservation	runObservation
runOnePermutationOnAllGenerations	runOnePermutationOnAllGenerations
runPermutation	runPermutation
samplesForTransgenerationalAnalysis	samplesForTransgenerationalAnalysis
saveInterGenerationResults	saveInterGenerationResults
validateExtractInfo	validateExtractInfo
validateLoadConvergenceData	validateLoadConvergenceData
validateMergePermutationAndObservation	validateMergePermutationAndObservation
validateRunObservation	validateRunObservation
validateRunPermutation	validateRunPermutation
