# This file created by conda-build 3.21.4
# meta.yaml template originally from:
# /opt/recipe, last modified Tue Nov  2 14:02:57 2021
# ------------------------------------------------

package:
  name: bioconductor-metagenomeseq
  version: 1.36.0
source:
  md5: f82c1bc269af5315cbf8ca4adc850b87
  url:
    - https://bioarchive.galaxyproject.org/metagenomeSeq_1.36.0.tar.gz
    - https://bioconductor.org/packages/3.14/bioc/src/contrib/metagenomeSeq_1.36.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-metagenomeseq/bioconductor-metagenomeseq_1.36.0_src_all.tar.gz
build:
  noarch: generic
  number: '0'
  rpaths:
    - lib/
    - lib/R/lib/
  string: r41hdfd78af_0
requirements:
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 1_gnu
    - _r-mutex 1.0.1 anacondar_1
    - binutils_impl_linux-64 2.36.1 h193b22a_2
    - binutils_linux-64 2.36 hf3e587d_1
    - bioconductor-biobase 2.54.0 r41hd029910_0
    - bioconductor-biocgenerics 0.40.0 r41hdfd78af_0
    - bioconductor-limma 3.50.0 r41hd029910_0
    - bioconductor-wrench 1.12.0 r41hdfd78af_0
    - bwidget 1.9.14 ha770c72_1
    - bzip2 1.0.8 h7f98852_4
    - c-ares 1.18.1 h7f98852_0
    - ca-certificates 2021.10.8 ha878542_0
    - cairo 1.16.0 h6cf1ce9_1008
    - curl 7.79.1 h494985f_1
    - font-ttf-dejavu-sans-mono 2.37 hab24e00_0
    - font-ttf-inconsolata 3.000 h77eed37_0
    - font-ttf-source-code-pro 2.038 h77eed37_0
    - font-ttf-ubuntu 0.83 hab24e00_0
    - fontconfig 2.13.1 hba837de_1005
    - fonts-conda-ecosystem 1 0
    - fonts-conda-forge 1 0
    - freetype 2.10.4 h0708190_1
    - fribidi 1.0.10 h36c2ea0_0
    - gcc_impl_linux-64 9.4.0 h03d3576_11
    - gcc_linux-64 9.4.0 h391b98a_1
    - gettext 0.19.8.1 h73d1719_1008
    - gfortran_impl_linux-64 9.4.0 h0003116_11
    - gfortran_linux-64 9.4.0 hf0ab688_1
    - graphite2 1.3.13 h58526e2_1001
    - gsl 2.7 he838d99_0
    - gxx_impl_linux-64 9.4.0 h03d3576_11
    - gxx_linux-64 9.4.0 h0316aca_1
    - harfbuzz 3.0.0 h83ec7ef_1
    - icu 68.2 h9c3ff4c_0
    - jbig 2.1 h7f98852_2003
    - jpeg 9d h36c2ea0_0
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - krb5 1.19.2 h48eae69_2
    - ld_impl_linux-64 2.36.1 hea4e1c9_2
    - lerc 3.0 h9c3ff4c_0
    - libblas 3.9.0 12_linux64_openblas
    - libcblas 3.9.0 12_linux64_openblas
    - libcurl 7.79.1 h494985f_1
    - libdeflate 1.8 h7f98852_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 h516909a_1
    - libffi 3.4.2 h9c3ff4c_4
    - libgcc-devel_linux-64 9.4.0 hd854feb_11
    - libgcc-ng 11.2.0 h1d223b6_11
    - libgfortran-ng 11.2.0 h69a702a_11
    - libgfortran5 11.2.0 h5c6108e_11
    - libglib 2.70.0 h174f98d_1
    - libgomp 11.2.0 h1d223b6_11
    - libiconv 1.16 h516909a_0
    - liblapack 3.9.0 12_linux64_openblas
    - libnghttp2 1.43.0 ha19adfc_1
    - libopenblas 0.3.18 pthreads_h8fe5266_0
    - libpng 1.6.37 h21135ba_2
    - libsanitizer 9.4.0 h79bfe98_11
    - libssh2 1.10.0 ha35d2d1_2
    - libstdcxx-devel_linux-64 9.4.0 hd854feb_11
    - libstdcxx-ng 11.2.0 he4da1e4_11
    - libtiff 4.3.0 h6f004c6_2
    - libuuid 2.32.1 h7f98852_1000
    - libwebp-base 1.2.1 h7f98852_0
    - libxcb 1.13 h7f98852_1003
    - libxml2 2.9.12 h72842e0_0
    - libzlib 1.2.11 h36c2ea0_1013
    - lz4-c 1.9.3 h9c3ff4c_1
    - make 4.3 hd18ef5c_1
    - ncurses 6.2 h58526e2_4
    - openssl 3.0.0 h7f98852_1
    - pango 1.48.10 h54213e6_2
    - pcre 8.45 h9c3ff4c_0
    - pcre2 10.37 h032f7d1_0
    - pixman 0.40.0 h36c2ea0_0
    - pthread-stubs 0.4 h36c2ea0_1001
    - r-base 4.1.1 hb93adac_1
    - r-bitops 1.0_7 r41hcfec24a_0
    - r-catools 1.18.2 r41h03ef668_0
    - r-codetools 0.2_18 r41hc72bb7e_0
    - r-foreach 1.5.1 r41hc72bb7e_0
    - r-glmnet 4.1_2 r41h859d828_0
    - r-gplots 3.1.1 r41hc72bb7e_0
    - r-gtools 3.9.2 r41hcfec24a_0
    - r-iterators 1.0.13 r41hc72bb7e_0
    - r-kernsmooth 2.23_20 r41h742201e_0
    - r-lattice 0.20_45 r41hcfec24a_0
    - r-locfit 1.5_9.4 r41hcfec24a_1
    - r-matrix 1.3_4 r41he454529_0
    - r-matrixstats 0.61.0 r41hcfec24a_0
    - r-rcolorbrewer 1.1_2 r41h785f33e_1003
    - r-shape 1.4.6 r41ha770c72_0
    - r-survival 3.2_13 r41hcfec24a_0
    - readline 8.1 h46c0cb4_0
    - sed 4.8 he412f7d_0
    - sysroot_linux-64 2.12 he073ed8_15
    - tk 8.6.11 h27826a3_1
    - tktable 2.10 hb7b940f_3
    - xorg-kbproto 1.0.7 h7f98852_1002
    - xorg-libice 1.0.10 h7f98852_0
    - xorg-libsm 1.2.3 hd9c2040_1000
    - xorg-libx11 1.7.2 h7f98852_0
    - xorg-libxau 1.0.9 h7f98852_0
    - xorg-libxdmcp 1.1.3 h7f98852_0
    - xorg-libxext 1.3.4 h7f98852_1
    - xorg-libxrender 0.9.10 h7f98852_1003
    - xorg-libxt 1.2.1 h7f98852_2
    - xorg-renderproto 0.11.1 h7f98852_1002
    - xorg-xextproto 7.3.0 h7f98852_1002
    - xorg-xproto 7.0.31 h7f98852_1007
    - xz 5.2.5 h516909a_1
    - zlib 1.2.11 h36c2ea0_1013
    - zstd 1.5.0 ha95c52a_0
  run:
    - bioconductor-biobase >=2.54.0,<2.55.0
    - bioconductor-limma >=3.50.0,<3.51.0
    - bioconductor-wrench >=1.12.0,<1.13.0
    - r-base >=4.1,<4.2.0a0
    - r-foreach
    - r-glmnet
    - r-gplots
    - r-matrix
    - r-matrixstats
    - r-rcolorbrewer
test:
  commands:
    - $R -e "library('metagenomeSeq')"
about:
  description: metagenomeSeq is designed to determine features (be it Operational
    Taxanomic Unit (OTU), species, etc.) that are differentially abundant between
    two or more groups of multiple samples. metagenomeSeq is designed to address the
    effects of both normalization and under-sampling of microbial communities on disease
    association detection and the testing of feature correlations.
  home: https://bioconductor.org/packages/3.14/bioc/html/metagenomeSeq.html
  license: Artistic-2.0
  summary: Statistical analysis for sparse high-throughput sequencing
extra:
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:metagenomeseq
    - doi:10.1038/nmeth.2658
