# This file created by conda-build 3.21.4
# meta.yaml template originally from:
# /opt/recipe, last modified Mon Mar 29 19:25:41 2021
# ------------------------------------------------

package:
  name: bioconductor-isobar
  version: 1.36.0
source:
  md5: e3249c71e17c4caf2e123f8b8ebcf588
  url:
    - https://bioarchive.galaxyproject.org/isobar_1.36.0.tar.gz
    - https://bioconductor.org/packages/3.12/bioc/src/contrib/isobar_1.36.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-isobar/bioconductor-isobar_1.36.0_src_all.tar.gz
build:
  noarch: generic
  number: '1'
  rpaths:
    - lib/
    - lib/R/lib/
  string: r40hdfd78af_1
requirements:
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 1_gnu
    - _r-mutex 1.0.1 anacondar_1
    - binutils_impl_linux-64 2.35.1 h193b22a_2
    - binutils_linux-64 2.35 h67ddf6f_30
    - bioconductor-annotationdbi 1.52.0 r40hdfd78af_1
    - bioconductor-biobase 2.50.0 r40hd029910_1
    - bioconductor-biocfilecache 1.14.0 r40hdfd78af_1
    - bioconductor-biocgenerics 0.36.0 r40hdfd78af_1
    - bioconductor-biomart 2.46.3 r40hdfd78af_0
    - bioconductor-iranges 2.24.1 r40hd029910_0
    - bioconductor-s4vectors 0.28.1 r40hd029910_0
    - bwidget 1.9.14 ha770c72_0
    - bzip2 1.0.8 h7f98852_4
    - c-ares 1.17.1 h7f98852_1
    - ca-certificates 2020.12.5 ha878542_0
    - cairo 1.16.0 h6cf1ce9_1008
    - curl 7.75.0 h979ede3_0
    - fontconfig 2.13.1 hba837de_1004
    - freetype 2.10.4 h0708190_1
    - fribidi 1.0.10 h36c2ea0_0
    - gcc_impl_linux-64 9.3.0 h70c0ae5_18
    - gcc_linux-64 9.3.0 hf25ea35_30
    - gettext 0.19.8.1 h0b5b191_1005
    - gfortran_impl_linux-64 9.3.0 hc4a2995_18
    - gfortran_linux-64 9.3.0 hdc58fab_30
    - graphite2 1.3.13 h58526e2_1001
    - gsl 2.6 he838d99_2
    - gxx_impl_linux-64 9.3.0 hd87eabc_18
    - gxx_linux-64 9.3.0 h3fbe746_30
    - harfbuzz 2.8.0 h83ec7ef_1
    - icu 68.1 h58526e2_0
    - jpeg 9d h36c2ea0_0
    - kernel-headers_linux-64 2.6.32 h77966d4_13
    - krb5 1.17.2 h926e7f8_0
    - ld_impl_linux-64 2.35.1 hea4e1c9_2
    - libblas 3.9.0 8_openblas
    - libcblas 3.9.0 8_openblas
    - libcurl 7.75.0 hc4aaa36_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 h516909a_1
    - libffi 3.3 h58526e2_2
    - libgcc-devel_linux-64 9.3.0 h7864c58_18
    - libgcc-ng 9.3.0 h2828fa1_18
    - libgfortran-ng 9.3.0 hff62375_18
    - libgfortran5 9.3.0 hff62375_18
    - libglib 2.68.0 h3e27bee_2
    - libgomp 9.3.0 h2828fa1_18
    - libiconv 1.16 h516909a_0
    - liblapack 3.9.0 8_openblas
    - libnghttp2 1.43.0 h812cca2_0
    - libopenblas 0.3.12 pthreads_h4812303_1
    - libpng 1.6.37 h21135ba_2
    - libssh2 1.9.0 ha56f1ee_6
    - libstdcxx-devel_linux-64 9.3.0 hb016644_18
    - libstdcxx-ng 9.3.0 h6de172a_18
    - libtiff 4.2.0 hdc55705_0
    - libuuid 2.32.1 h7f98852_1000
    - libwebp-base 1.2.0 h7f98852_2
    - libxcb 1.13 h7f98852_1003
    - libxml2 2.9.10 h72842e0_3
    - lz4-c 1.9.3 h9c3ff4c_0
    - make 4.3 hd18ef5c_1
    - ncurses 6.2 h58526e2_4
    - openssl 1.1.1k h7f98852_0
    - pango 1.48.4 hb8ff022_0
    - pcre 8.44 he1b5a44_0
    - pcre2 10.36 h032f7d1_1
    - pixman 0.40.0 h36c2ea0_0
    - pthread-stubs 0.4 h36c2ea0_1001
    - r-askpass 1.1 r40hcdcec82_2
    - r-assertthat 0.2.1 r40h6115d3f_2
    - r-backports 1.2.1 r40hcfec24a_0
    - r-base 4.0.3 h349a78a_8
    - r-bit 4.0.4 r40hcdcec82_0
    - r-bit64 4.0.5 r40hcdcec82_0
    - r-blob 1.2.1 r40h6115d3f_1
    - r-brio 1.1.1 r40hcfec24a_0
    - r-cachem 1.0.4 r40hcfec24a_0
    - r-callr 3.6.0 r40hc72bb7e_0
    - r-cli 2.3.1 r40hc72bb7e_0
    - r-colorspace 2.0_0 r40h9e2df91_0
    - r-crayon 1.4.1 r40hc72bb7e_0
    - r-curl 4.3 r40hcfec24a_1
    - r-dbi 1.1.1 r40hc72bb7e_0
    - r-dbplyr 2.1.0 r40hc72bb7e_0
    - r-desc 1.3.0 r40hc72bb7e_0
    - r-diffobj 0.3.3 r40hcfec24a_0
    - r-digest 0.6.27 r40h1b71b39_0
    - r-distr 2.8.0 r40hcdcec82_2
    - r-dplyr 1.0.5 r40h03ef668_0
    - r-ellipsis 0.3.1 r40hcdcec82_0
    - r-evaluate 0.14 r40h6115d3f_2
    - r-fansi 0.4.2 r40hcfec24a_0
    - r-farver 2.1.0 r40h03ef668_0
    - r-fastmap 1.1.0 r40h03ef668_0
    - r-generics 0.1.0 r40hc72bb7e_0
    - r-ggplot2 3.3.3 r40hc72bb7e_0
    - r-glue 1.4.2 r40hcfec24a_0
    - r-gtable 0.3.0 r40h6115d3f_3
    - r-hms 1.0.0 r40hc72bb7e_0
    - r-httr 1.4.2 r40h6115d3f_0
    - r-isoband 0.2.4 r40h03ef668_0
    - r-jsonlite 1.7.2 r40hcfec24a_0
    - r-labeling 0.4.2 r40h142f84f_0
    - r-lattice 0.20_41 r40hcfec24a_3
    - r-lifecycle 1.0.0 r40hc72bb7e_0
    - r-magrittr 2.0.1 r40hcfec24a_1
    - r-mass 7.3_53.1 r40hcfec24a_0
    - r-matrix 1.3_2 r40he454529_0
    - r-memoise 2.0.0 r40hc72bb7e_0
    - r-mgcv 1.8_34 r40he454529_0
    - r-mime 0.10 r40hcfec24a_0
    - r-munsell 0.5.0 r40h6115d3f_1003
    - r-nlme 3.1_152 r40h859d828_0
    - r-openssl 1.4.3 r40he5c4762_0
    - r-pillar 1.5.1 r40hc72bb7e_0
    - r-pkgbuild 1.2.0 r40hc72bb7e_0
    - r-pkgconfig 2.0.3 r40h6115d3f_1
    - r-pkgload 1.2.0 r40h03ef668_0
    - r-plogr 0.2.0 r40h6115d3f_1003
    - r-plyr 1.8.6 r40h0357c0b_1
    - r-praise 1.0.0 r40h6115d3f_1004
    - r-prettyunits 1.1.1 r40h6115d3f_1
    - r-processx 3.5.0 r40hcfec24a_0
    - r-progress 1.2.2 r40h6115d3f_2
    - r-ps 1.6.0 r40hcfec24a_0
    - r-purrr 0.3.4 r40hcdcec82_1
    - r-r6 2.5.0 r40hc72bb7e_0
    - r-rappdirs 0.3.3 r40hcfec24a_0
    - r-rcolorbrewer 1.1_2 r40h6115d3f_1003
    - r-rcpp 1.0.6 r40h03ef668_0
    - r-rematch2 2.1.2 r40h6115d3f_1
    - r-rlang 0.4.10 r40hcfec24a_0
    - r-rprojroot 2.0.2 r40hc72bb7e_0
    - r-rsqlite 2.2.5 r40h03ef668_0
    - r-rstudioapi 0.13 r40hc72bb7e_0
    - r-scales 1.1.1 r40h6115d3f_0
    - r-sfsmisc 1.1_10 r40hc72bb7e_0
    - r-startupmsg 0.9.6 r40h6115d3f_2
    - r-stringi 1.5.3 r40hcabe038_1
    - r-stringr 1.4.0 r40h6115d3f_2
    - r-sys 3.4 r40hcdcec82_0
    - r-testthat 3.0.2 r40h03ef668_0
    - r-tibble 3.1.0 r40hcfec24a_1
    - r-tidyselect 1.1.0 r40h6115d3f_0
    - r-utf8 1.2.1 r40hcfec24a_0
    - r-vctrs 0.3.7 r40hcfec24a_0
    - r-viridislite 0.3.0 r40h6115d3f_1003
    - r-waldo 0.2.5 r40hc72bb7e_0
    - r-withr 2.4.1 r40hc72bb7e_0
    - r-xml 3.99_0.6 r40hcfec24a_0
    - r-xml2 1.3.2 r40h0357c0b_1
    - r-zeallot 0.1.0 r40h6115d3f_1002
    - readline 8.0 he28a2e2_2
    - sed 4.8 he412f7d_0
    - sysroot_linux-64 2.12 h77966d4_13
    - tk 8.6.10 h21135ba_1
    - tktable 2.10 hb7b940f_3
    - xorg-kbproto 1.0.7 h7f98852_1002
    - xorg-libice 1.0.10 h7f98852_0
    - xorg-libsm 1.2.3 hd9c2040_1000
    - xorg-libx11 1.7.0 h7f98852_0
    - xorg-libxau 1.0.9 h7f98852_0
    - xorg-libxdmcp 1.1.3 h7f98852_0
    - xorg-libxext 1.3.4 h7f98852_1
    - xorg-libxrender 0.9.10 h7f98852_1003
    - xorg-libxt 1.2.1 h7f98852_2
    - xorg-renderproto 0.11.1 h7f98852_1002
    - xorg-xextproto 7.3.0 h7f98852_1002
    - xorg-xproto 7.0.31 h7f98852_1007
    - xz 5.2.5 h516909a_1
    - zlib 1.2.11 h516909a_1010
    - zstd 1.4.9 ha95c52a_0
  run:
    - bioconductor-biobase >=2.50.0,<2.51.0
    - bioconductor-biomart >=2.46.0,<2.47.0
    - r-base >=4.0,<4.1.0a0
    - r-distr
    - r-ggplot2
    - r-plyr
test:
  commands:
    - $R -e "library('isobar')"
about:
  description: isobar provides methods for preprocessing, normalization, and report
    generation for the analysis of quantitative mass spectrometry proteomics data
    labeled with isobaric tags, such as iTRAQ and TMT. Features modules for integrating
    and validating PTM-centric datasets (isobar-PTM). More information on http://www.ms-isobar.org.
  home: https://bioconductor.org/packages/3.12/bioc/html/isobar.html
  license: LGPL-2
  license_file: /opt/conda/conda-bld/bioconductor-isobar_1617063755164/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/lib/R/share/licenses/LGPL-2
  summary: Analysis and quantitation of isobarically tagged MSMS proteomics data
extra:
  copy_test_source_files: true
  final: true
