{% set version = "1.36.0" %}
{% set name = "isobar" %}
{% set bioc = "3.12" %}

package:
  name: 'bioconductor-{{ name|lower }}'
  version: '{{ version }}'
source:
  url:
    - 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
    - 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
    - 'https://depot.galaxyproject.org/software/bioconductor-{{ name }}/bioconductor-{{ name }}_{{ version }}_src_all.tar.gz'
  md5: e3249c71e17c4caf2e123f8b8ebcf588
build:
  number: 1
  rpaths:
    - lib/R/lib/
    - lib/
  noarch: generic
# Suggests: MSnbase, OrgMassSpecR, XML, RJSONIO, Hmisc, gplots, RColorBrewer, gridExtra, limma, boot, DBI, MASS
requirements:
  host:
    - 'bioconductor-biobase >=2.50.0,<2.51.0'
    - 'bioconductor-biomart >=2.46.0,<2.47.0'
    - r-base
    - r-distr
    - r-ggplot2
    - r-plyr
  run:
    - 'bioconductor-biobase >=2.50.0,<2.51.0'
    - 'bioconductor-biomart >=2.46.0,<2.47.0'
    - r-base
    - r-distr
    - r-ggplot2
    - r-plyr
test:
  commands:
    - '$R -e "library(''{{ name }}'')"'
about:
  home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
  license: LGPL-2
  summary: 'Analysis and quantitation of isobarically tagged MSMS proteomics data'
  description: 'isobar provides methods for preprocessing, normalization, and report generation for the analysis of quantitative mass spectrometry proteomics data labeled with isobaric tags, such as iTRAQ and TMT. Features modules for integrating and validating PTM-centric datasets (isobar-PTM). More information on http://www.ms-isobar.org.'
  license_file: '{{ environ["PREFIX"] }}/lib/R/share/licenses/LGPL-2'

