Package: iSEE
Title: Interactive SummarizedExperiment Explorer
Version: 1.2.0
Date: 2018-10-24
Authors@R: c(person("Kevin", "Rue-Albrecht", role = "aut", email = "kevin.rue-albrecht@kennedy.ox.ac.uk"),
    person("Federico", "Marini", role="aut", email="marinif@uni-mainz.de"),
    person("Charlotte", "Soneson", role=c("aut", "cre"), email="charlottesoneson@gmail.com"),
    person("Aaron", "Lun", role="aut", email="infinite.monkeys.with.keyboards@gmail.com"))
Description: Provides functions for creating an interactive 
    Shiny-based graphical user interface for exploring data 
    stored in SummarizedExperiment objects, including row- and
    column-level metadata. Particular attention is given to 
    single-cell data in a SingleCellExperiment object with 
    visualization of dimensionality reduction results.
Depends: R (>= 3.5), SummarizedExperiment, SingleCellExperiment
Imports: methods, BiocGenerics, S4Vectors, utils, stats, shiny,
        shinydashboard, shinyAce, shinyjs, DT, rintrojs, ggplot2,
        colourpicker, igraph, vipor, mgcv, reshape2, rentrez,
        AnnotationDbi, graphics, grDevices, viridisLite, cowplot,
        scales, dplyr
Suggests: testthat, BiocStyle, knitr, rmarkdown, scRNAseq, scater,
        DelayedArray (>= 0.7.44), Rtsne, irlba, RColorBrewer, viridis,
        org.Mm.eg.db, htmltools
URL: https://github.com/csoneson/iSEE
BugReports: https://github.com/csoneson/iSEE/issues
biocViews: Visualization, GUI, DimensionReduction, FeatureExtraction,
        Clustering, Transcription, GeneExpression, Transcriptomics,
        SingleCell, CellBasedAssays
License: MIT + file LICENSE
VignetteBuilder: knitr
RoxygenNote: 6.1.0
git_url: https://git.bioconductor.org/packages/iSEE
git_branch: RELEASE_3_8
git_last_commit: 170a20c
git_last_commit_date: 2018-10-30
Date/Publication: 2018-10-30
NeedsCompilation: no
Packaged: 2018-10-31 02:22:07 UTC; biocbuild
Author: Kevin Rue-Albrecht [aut],
  Federico Marini [aut],
  Charlotte Soneson [aut, cre],
  Aaron Lun [aut]
Maintainer: Charlotte Soneson <charlottesoneson@gmail.com>
Built: R 3.5.1; ; 2018-12-25 05:54:26 UTC; unix
