combineInTAD	combineInTAD
combineWithLoops	combineWithLoops
enhSel	enhSel
enhSelGR	enhSelGR
exprs,InTADSig-method	exprs
filterGeneExpr	filterGeneExpr
findCorFromLoops	findCorFromLoops
findCorrelation	findCorrelation
fnSE	fnSE
geneCoords	geneCoords
geneCoords,InTADSig-method	geneCoords
get.enr.bg.normfit	get.enr.bg.normfit
InTADSig	InTADSig
InTADSig-class	InTADSig
loadSigInTAD	loadSigInTAD
loopsDfSel	loopsDfSel
mbAnnData	mbAnnData
newSigInTAD	newSigInTAD
plotCorAcrossRef	plotCorAcrossRef
plotCorrelation	plotCorrelation
rpkmCountsSel	rpkmCountsSel
sigCoords	sigCoords
sigCoords,InTADSig-method	sigCoords
signals	signals
signals,InTADSig-method	signals
tadGR	tadGR
txsSel	txsSel
