Package: HTSeqGenie
Imports: BiocGenerics (>= 0.2.0), S4Vectors (>= 0.9.25), IRanges (>=
        1.21.39), GenomicRanges (>= 1.23.21), Rsamtools (>= 1.8.5),
        Biostrings (>= 2.24.1), chipseq (>= 1.6.1), hwriter (>= 1.3.0),
        Cairo (>= 1.5.5), GenomicFeatures (>= 1.9.31), BiocParallel,
        parallel, tools, rtracklayer (>= 1.17.19), GenomicAlignments,
        VariantTools (>= 1.7.7), GenomeInfoDb, SummarizedExperiment,
        methods
Maintainer: Jens Reeder <reeder.jens@gene.com>
License: Artistic-2.0
Title: A NGS analysis pipeline.
Type: Package
LazyLoad: yes
Author: Gregoire Pau, Jens Reeder
Description: Libraries to perform NGS analysis.
Version: 4.20.0
Depends: R (>= 3.0.0), gmapR (>= 1.8.0), ShortRead (>= 1.19.13),
        VariantAnnotation (>= 1.8.3)
Suggests: TxDb.Hsapiens.UCSC.hg19.knownGene, LungCancerLines,
        org.Hs.eg.db
RoxygenNote: 5.0.1
git_url: https://git.bioconductor.org/packages/HTSeqGenie
git_branch: RELEASE_3_12
git_last_commit: 1967349
git_last_commit_date: 2020-10-27
Date/Publication: 2020-10-27
NeedsCompilation: no
Packaged: 2020-10-28 00:57:35 UTC; biocbuild
Built: R 4.0.3; ; 2021-04-03 10:48:13 UTC; unix
