## template
template_config: RNASeq-TP53-config.txt

## input
input_file: inst/test-data/unit_tests_1.fastq
input_file2: inst/test-data/unit_tests_2.fastq
paired_ends: TRUE
quality_encoding: illumina1.5

## output
save_dir: test_pe
overwrite_save_dir: erase
prepend_str: test_pe

## aligner
alignReads.sam_id: test_pe

## no RRNA detection with TP53 genome
detectRRNA.do: FALSE
