Package: HiContacts
Title: HiContacts: R interface to cool files
Version: 1.0.0
Date: 2022-08-16
Authors@R: 
    c(person(given = "Jacques",
           family = "Serizay",
           role = c("aut", "cre"),
           email = "jacquesserizay@gmail.com",
           comment = c(ORCID = "0000-0002-4295-0624")))
Description: HiContacts: R interface to (m)cool files and other Hi-C 
    processed file formats. HiContacts provides a collection of tools to 
    analyse and visualize Hi-C datasets. It can import data from pairs 
    or (m)cool files.
License: MIT + file LICENSE
URL: https://github.com/js2264/HiContacts
BugReports: https://github.com/js2264/HiContacts/issues
Depends: R (>= 4.2)
Imports: HiContactsData, InteractionSet, GenomicInteractions,
        GenomicRanges, IRanges, GenomeInfoDb, S4Vectors, BiocGenerics,
        methods, rhdf5, Matrix, vroom, tibble, tidyr, dplyr, glue,
        stringr, reticulate, ggplot2, ggrastr, scales
Suggests: cowplot, testthat (>= 3.0.0), BiocStyle, knitr, rmarkdown
biocViews: HiC, DNA3DStructure, DataImport
Encoding: UTF-8
VignetteBuilder: knitr
LazyData: false
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.1
git_url: https://git.bioconductor.org/packages/HiContacts
git_branch: RELEASE_3_16
git_last_commit: ad3c78e
git_last_commit_date: 2022-11-01
Date/Publication: 2022-11-01
NeedsCompilation: no
Packaged: 2022-11-01 21:50:25 UTC; biocbuild
Author: Jacques Serizay [aut, cre] (<https://orcid.org/0000-0002-4295-0624>)
Maintainer: Jacques Serizay <jacquesserizay@gmail.com>
Built: R 4.2.2; ; 2022-11-09 09:32:53 UTC; unix
