{% set version = "1.8.0" %}
{% set name = "GmicR" %}
{% set bioc = "3.14" %}

package:
  name: 'bioconductor-{{ name|lower }}'
  version: '{{ version }}'
source:
  url:
    - 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
    - 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
    - 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
  md5: cfe413ca13576a7ed747b9c81f433592
build:
  number: 0
  rpaths:
    - lib/R/lib/
    - lib/
  noarch: generic
# Suggests: knitr, rmarkdown, testthat
requirements:
  host:
    - 'bioconductor-annotationdbi >=1.56.0,<1.57.0'
    - 'bioconductor-category >=2.60.0,<2.61.0'
    - 'bioconductor-gostats >=2.60.0,<2.61.0'
    - 'bioconductor-gseabase >=1.56.0,<1.57.0'
    - 'bioconductor-org.hs.eg.db >=3.14.0,<3.15.0'
    - 'bioconductor-org.mm.eg.db >=3.14.0,<3.15.0'
    - r-ape
    - r-base
    - r-bnlearn
    - r-data.table
    - r-doparallel
    - r-dt
    - r-foreach
    - r-grain
    - r-grbase
    - r-reshape2
    - r-shiny
    - r-wgcna
  run:
    - 'bioconductor-annotationdbi >=1.56.0,<1.57.0'
    - 'bioconductor-category >=2.60.0,<2.61.0'
    - 'bioconductor-gostats >=2.60.0,<2.61.0'
    - 'bioconductor-gseabase >=1.56.0,<1.57.0'
    - 'bioconductor-org.hs.eg.db >=3.14.0,<3.15.0'
    - 'bioconductor-org.mm.eg.db >=3.14.0,<3.15.0'
    - r-ape
    - r-base
    - r-bnlearn
    - r-data.table
    - r-doparallel
    - r-dt
    - r-foreach
    - r-grain
    - r-grbase
    - r-reshape2
    - r-shiny
    - r-wgcna
test:
  commands:
    - '$R -e "library(''{{ name }}'')"'
about:
  home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
  license: 'GPL-2 + file LICENSE'
  summary: 'Combines WGCNA and xCell readouts with bayesian network learrning to generate a Gene-Module Immune-Cell network (GMIC)'
  description: 'This package uses bayesian network learning to detect relationships between Gene Modules detected by WGCNA and immune cell signatures defined by xCell. It is a hypothesis generating tool.'
  license_file: LICENSE

