Package: ggspavis
Version: 1.12.0
Title: Visualization functions for spatial transcriptomics data
Description: Visualization functions for spatial transcriptomics data. Includes 
    functions to generate several types of plots, including spot plots, feature 
    (molecule) plots, reduced dimension plots, spot-level quality control (QC) 
    plots, and feature-level QC plots, for datasets from the 10x Genomics 
    Visium and other technological platforms. Datasets are assumed to be in 
    either SpatialExperiment or SingleCellExperiment format.
Authors@R: c(
    person("Lukas M.", "Weber", 
        email = "lmweberedu@gmail.com", 
        role = c("aut", "cre"), 
        comment = c(ORCID = "0000-0002-3282-1730")), 
    person("Helena L.", "Crowell", 
        email = "helena.crowell@uzh.ch", 
        role = c("aut"), 
        comment = c(ORCID = "0000-0002-4801-1767")), 
    person("Yixing E.", "Dong", 
        email = "estelladong729@gmail.com", 
        role = c("aut"), 
        comment = c(ORCID = "0009-0003-5115-5686")))
URL: https://github.com/lmweber/ggspavis
BugReports: https://github.com/lmweber/ggspavis/issues
License: MIT + file LICENSE
Encoding: UTF-8
biocViews: Spatial, SingleCell, Transcriptomics, GeneExpression,
        QualityControl, DimensionReduction
Depends: ggplot2
Imports: SpatialExperiment, SingleCellExperiment, SummarizedExperiment,
        ggside, grid, ggrepel, RColorBrewer, scales, grDevices,
        methods, stats
VignetteBuilder: knitr
Suggests: BiocStyle, rmarkdown, knitr, STexampleData, BumpyMatrix,
        scater, scran, uwot, testthat, patchwork
RoxygenNote: 7.3.1
git_url: https://git.bioconductor.org/packages/ggspavis
git_branch: RELEASE_3_20
git_last_commit: cf9a5c6
git_last_commit_date: 2024-10-29
Repository: Bioconductor 3.20
Date/Publication: 2024-10-29
NeedsCompilation: no
Packaged: 2024-10-30 00:55:15 UTC; biocbuild
Author: Lukas M. Weber [aut, cre] (<https://orcid.org/0000-0002-3282-1730>),
  Helena L. Crowell [aut] (<https://orcid.org/0000-0002-4801-1767>),
  Yixing E. Dong [aut] (<https://orcid.org/0009-0003-5115-5686>)
Maintainer: Lukas M. Weber <lmweberedu@gmail.com>
Built: R 4.4.2; ; 2024-12-22 11:58:49 UTC; unix
