$,GGbio-method	ggbio-class
$<-,GGbio-method	ggbio-class
+,Bioplot,Any-method	autoplot-method
+,GGbio,ANY-method	ggbio-class
+,Ideogram,ANY-method	plotSingleChrom
align.plots	tracks
alignPlots	tracks
Arith	tracks
Arith,Tracks,ANY-method	tracks
arrangeGrobByParsingLegend	arrangeGrobByParsingLegend
autoplot	autoplot-method
autoplot,BamFile-method	autoplot-method
autoplot,BamFileList-method	autoplot-method
autoplot,BSgenome-method	autoplot-method
autoplot,character-method	autoplot-method
autoplot,ExpressionSet-method	autoplot-method
autoplot,GAlignments-method	autoplot-method
autoplot,GRanges-method	autoplot-method
autoplot,GRangesList-method	autoplot-method
autoplot,IRanges-method	autoplot-method
autoplot,matrix-method	autoplot-method
autoplot,OrganismDb-method	autoplot-method
autoplot,RangedSummarizedExperiment-method	autoplot-method
autoplot,Rle-method	autoplot-method
autoplot,RleList-method	autoplot-method
autoplot,Seqinfo-method	autoplot-method
autoplot,TabixFile-method	autoplot-method
autoplot,TxDbOREnsDb-method	autoplot-method
autoplot,VCF-method	autoplot-method
autoplot,Views-method	autoplot-method
autoplot,VRanges-method	autoplot-method
backup	tracks
backup,Tracks-method	tracks
bgColor	tracks
bgColor,gg-method	tracks
bgColor,GGbio-method	tracks
bgColor,gtable-method	tracks
bgColor,Tracked-method	tracks
bgColor<-	tracks
bgColor<-,gg,character-method	tracks
bgColor<-,GGbio,character-method	tracks
bgColor<-,gtable,character-method	tracks
bgColor<-,Tracked,character-method	tracks
c,PlotList-method	tracks
c,Tracks-method	tracks
cbind,Tracks-method	tracks
circle	layout_circle-method
coerce,Tracks,grob-method	tracks
fixed,gg-method	tracks
fixed,GGbio-method	tracks
fixed,Tracked-method	tracks
fixed<-,gg,logical-method	tracks
fixed<-,GGbio,logical-method	tracks
fixed<-,Tracked,logical-method	tracks
geom_alignment	geom_alignment-method
geom_alignment,BamFile-method	geom_alignment-method
geom_alignment,GRanges-method	geom_alignment-method
geom_alignment,GRangesList-method	geom_alignment-method
geom_alignment,missing-method	geom_alignment-method
geom_alignment,OrganismDb-method	geom_alignment-method
geom_alignment,TxDbOREnsDb-method	geom_alignment-method
geom_alignment,uneval-method	geom_alignment-method
geom_arch	geom_arch-method
geom_arch,data.frame-method	geom_arch-method
geom_arch,GRanges-method	geom_arch-method
geom_arch,missing-method	geom_arch-method
geom_arch,uneval-method	geom_arch-method
geom_arrow	geom_arrow-method
geom_arrow,GRanges-method	geom_arrow-method
geom_arrow,missing-method	geom_arrow-method
geom_arrow,uneval-method	geom_arrow-method
geom_arrowrect	geom_arrowrect-method
geom_arrowrect,GRanges-method	geom_arrowrect-method
geom_arrowrect,missing-method	geom_arrowrect-method
geom_arrowrect,uneval-method	geom_arrowrect-method
geom_bar	geom_bar-method
geom_bar,ANY-method	geom_bar-method
geom_bar,chevron-method	geom_bar-method
geom_bar,GRanges-method	geom_bar-method
geom_bar,missing-method	geom_bar-method
geom_chevron	geom_chevron-method
geom_chevron,GRanges-method	geom_chevron-method
geom_chevron,missing-method	geom_chevron-method
geom_chevron,uneval-method	geom_chevron-method
geom_rect	geom_rect-method
geom_rect,ANY-method	geom_rect-method
geom_rect,GRanges-method	geom_rect-method
geom_rect,missing-method	geom_rect-method
geom_rect,uneval-method	geom_rect-method
geom_segment	geom_segment-method
geom_segment,ANY-method	geom_segment-method
geom_segment,GRanges-method	geom_segment-method
geom_segment,missing-method	geom_segment-method
geom_segment,uneval-method	geom_segment-method
GGbio	ggbio-class
ggbio	ggbio-class
GGbio-class	ggbio-class
ggbio-class	ggbio-class
ggbioPlot-class	Plot-class
ggplot.BSgenome	ggplot-method
ggplot.character	ggplot-method
ggplot.ExpressionSet	ggplot-method
ggplot.GAlignments	ggplot-method
ggplot.matrix	ggplot-method
ggplot.RsamtoolsFile	ggplot-method
ggplot.Seqinfo	ggplot-method
ggplot.SummarizedExperiment	ggplot-method
ggplot.TxDbOREnsDb	ggplot-method
ggplot.VCF	ggplot-method
ggplot.Vector	ggplot-method
ggplotGrob-class	Grob-class
ggplotPlot-class	Plot-class
ggsave	ggsave
Grob	Grob-class
Grob,gg-method	Grob-class
Grob,GGbio-method	Grob-class
Grob,gtable-method	Grob-class
Grob,lattice-method	Grob-class
Grob,trellis-method	Grob-class
Grob-class	Grob-class
Grob-method	Grob-class
GrobList	Grob-class
GrobList-class	Grob-class
hasAxis	tracks
hasAxis,gg-method	tracks
hasAxis,GGbio-method	tracks
hasAxis,Tracked-method	tracks
hasAxis<-	tracks
hasAxis<-,gg,logical-method	tracks
hasAxis<-,GGbio,logical-method	tracks
hasAxis<-,Tracked,logical-method	tracks
height	tracks
height,gg-method	tracks
height,GGbio-method	tracks
height,Tracked-method	tracks
height<-	tracks
height<-,gg,numericORunit-method	tracks
height<-,GGbio,numericORunit-method	tracks
height<-,Tracked,numericORunit-method	tracks
Ideogram	plotSingleChrom
Ideogram-class	plotSingleChrom
labeled	tracks
labeled,gg-method	tracks
labeled,GGbio-method	tracks
labeled,gtable-method	tracks
labeled,gTree-method	tracks
labeled,Ideogram-method	tracks
labeled,text-method	tracks
labeled,Tracked-method	tracks
labeled<-	tracks
labeled<-,gg,logical-method	tracks
labeled<-,GGbio,logical-method	tracks
labeled<-,gtable,logical-method	tracks
labeled<-,Ideogram,logical-method	tracks
labeled<-,Tracked,logical-method	tracks
latticeGrob-class	Grob-class
latticePlot-class	Plot-class
layout_circle	layout_circle-method
layout_circle,GRanges-method	layout_circle-method
layout_circle,missing-method	layout_circle-method
layout_circle,uneval-method	layout_circle-method
layout_karyogram	layout_karyogram-method
layout_karyogram,GRanges-method	layout_karyogram-method
mutable	tracks
mutable,gg-method	tracks
mutable,GGbio-method	tracks
mutable,Tracked-method	tracks
mutable<-	tracks
mutable<-,gg,logical-method	tracks
mutable<-,GGbio,logical-method	tracks
mutable<-,Tracked,logical-method	tracks
nextView	nav
Plot	Plot-class
Plot,gg-method	Plot-class
Plot,GGbio-method	Plot-class
Plot,Ideogram-method	Plot-class
Plot,trellis-method	Plot-class
Plot-class	Plot-class
plotFragLength	plotFragLength
plotFragLength,character,GRanges-method	plotFragLength
plotGrandLinear	plotGrandLinear
plotIdeogram	plotSingleChrom
plotKaryogram	plotStackedOverview
plotRangesLinkedToData	plotRangesLinkedToData
plotRangesLinkedToData,GenomicRanges_OR_GRangesList-method	plotRangesLinkedToData
plotRangesLinkedToData,RangedSummarizedExperiment-method	plotRangesLinkedToData
plotSpliceSum	plotSpliceSum
plotSpliceSum,character,EnsDb-method	plotSpliceSum
plotSpliceSum,character,GRangesList-method	plotSpliceSum
plotSpliceSum,character,TxDb-method	plotSpliceSum
plotStackedOverview	plotStackedOverview
prevView	nav
print	tracks
print,Tracks-method	tracks
rbind,Tracks-method	tracks
rescale	rescale-method
rescale,gg-method	rescale-method
rescale,ggplot-method	rescale-method
rescale,numeric-method	rescale-method
reset	tracks
reset,Tracks-method	tracks
scale_fill_fold_change	scale_fill_fold_change
scale_fill_giemsa	scale_fill_giemsa
scale_x_sequnit	scale_x_sequnit
show	tracks
show,Tracks-method	tracks
stat_aggregate	stat_aggregate-method
stat_aggregate,GRanges-method	stat_aggregate-method
stat_aggregate,missing-method	stat_aggregate-method
stat_aggregate,uneval-method	stat_aggregate-method
stat_bin	stat_bin-method
stat_bin,ANY-method	stat_bin-method
stat_bin,missing-method	stat_bin-method
stat_bin,Rle-method	stat_bin-method
stat_bin,RleList-method	stat_bin-method
stat_bin,uneval-method	stat_bin-method
stat_coverage	stat_coverage-method
stat_coverage,BamFile-method	stat_coverage-method
stat_coverage,GRanges-method	stat_coverage-method
stat_coverage,GRangesList-method	stat_coverage-method
stat_coverage,missing-method	stat_coverage-method
stat_coverage,uneval-method	stat_coverage-method
stat_gene	stat_gene-method
stat_gene,TxDb-method	stat_gene-method
stat_identity	stat_identity-method
stat_identity,ANY-method	stat_identity-method
stat_identity,GRanges-method	stat_identity-method
stat_identity,missing-method	stat_identity-method
stat_identity,Rle-method	stat_identity-method
stat_identity,RleList-method	stat_identity-method
stat_identity,uneval-method	stat_identity-method
stat_mismatch	stat_mismatch-method
stat_mismatch,BamFile-method	stat_mismatch-method
stat_mismatch,GRanges-method	stat_mismatch-method
stat_mismatch,missing-method	stat_mismatch-method
stat_mismatch,uneval-method	stat_mismatch-method
stat_reduce	stat_reduce-method
stat_reduce,GRanges-method	stat_reduce-method
stat_reduce,IRanges-method	stat_reduce-method
stat_reduce,missing-method	stat_reduce-method
stat_reduce,TxDbOREnsDb-method	stat_reduce-method
stat_reduce,uneval-method	stat_reduce-method
stat_slice	stat_slice-method
stat_slice,missing-method	stat_slice-method
stat_slice,Rle-method	stat_slice-method
stat_slice,RleList-method	stat_slice-method
stat_slice,uneval-method	stat_slice-method
stat_stepping	stat_stepping-method
stat_stepping,GRanges-method	stat_stepping-method
stat_stepping,missing-method	stat_stepping-method
stat_stepping,uneval-method	stat_stepping-method
stat_table	stat_table-method
stat_table,GRanges-method	stat_table-method
stat_table,GRangesList-method	stat_table-method
stat_table,missing-method	stat_table-method
stat_table,uneval-method	stat_table-method
summary	tracks
summary,Tracks-method	tracks
theme_alignment	theme
theme_clear	theme
theme_genome	theme
theme_noexpand	theme
theme_null	theme
theme_pack_panels	theme
theme_tracks_sunset	theme
Tracked	Tracked-class
Tracked-class	Tracked-class
tracks	tracks
Tracks-class	tracks
xlim	tracks
xlim,GRanges-method	tracks
xlim,IRanges-method	tracks
xlim,numeric-method	tracks
xlim,Tracks-method	tracks
xlim<-	tracks
xlim<-,Tracks,GRanges-method	tracks
xlim<-,Tracks,IRanges-method	tracks
xlim<-,Tracks,numeric-method	tracks
zoom	nav
zoom_in	nav
zoom_out	nav
[,PlotList,numeric,missing,ANY-method	tracks
[,Tracks,numeric,missing,ANY-method	tracks
