Package: gespeR
Imports: Matrix, glmnet, cellHTS2, Biobase, biomaRt, doParallel,
        parallel, foreach, reshape2, dplyr
Depends: methods, graphics, ggplot2, R(>= 2.10)
Suggests: knitr
biocViews: CellBasedAssays, Preprocessing, GeneTarget, Regression,
        Visualization
VignetteBuilder: knitr
Type: Package
Lazyload: yes
Title: Gene-Specific Phenotype EstimatoR
Version: 1.14.0
Date: 2015-07-22
Author: Fabian Schmich
Maintainer: Fabian Schmich <fabian.schmich@bsse.ethz.ch>
Description: Estimates gene-specific phenotypes from off-target confounded RNAi
    screens. The phenotype of each siRNA is modeled based on on-targeted and
    off-targeted genes, using a regularized linear regression model.
License: GPL-3
URL: http://www.cbg.ethz.ch/software/gespeR
Collate: 'Phenotypes-class.R' 'TargetRelations-class.R'
        'gespeR-class.R' 'gespeR-concordance.R' 'gespeR-functions.R'
        'gespeR-generics.R' 'gespeR-methods.R' 'gespeR-package.R'
git_url: https://git.bioconductor.org/packages/gespeR
git_branch: RELEASE_3_8
git_last_commit: 8889861
git_last_commit_date: 2018-10-30
Date/Publication: 2018-10-30
NeedsCompilation: no
Packaged: 2018-10-31 00:30:29 UTC; biocbuild
Built: R 3.5.1; ; 2019-01-04 20:44:07 UTC; unix
