# This file created by conda-build 3.24.0
# meta.yaml template originally from:
# /opt/recipe, last modified Mon Jul 10 16:14:25 2023
# ------------------------------------------------

package:
  name: bioconductor-geoquery
  version: 2.68.0
source:
  md5: 006c81971e10ad7dd94c875daa8a75af
  url:
    - https://bioarchive.galaxyproject.org/GEOquery_2.68.0.tar.gz
    - https://bioconductor.org/packages/3.17/bioc/src/contrib/Archive/GEOquery/GEOquery_2.68.0.tar.gz
    - https://bioconductor.org/packages/3.17/bioc/src/contrib/GEOquery_2.68.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-geoquery/bioconductor-geoquery_2.68.0_src_all.tar.gz
build:
  noarch: generic
  number: '0'
  rpaths:
    - lib/
    - lib/R/lib/
  string: r43hdfd78af_0
requirements:
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - _r-mutex 1.0.1 anacondar_1
    - binutils_impl_linux-64 2.40 hf600244_0
    - bioconductor-biobase 2.60.0 r43ha9d7317_0
    - bioconductor-biocgenerics 0.46.0 r43hdfd78af_0
    - bioconductor-limma 3.56.2 r43ha9d7317_0
    - bwidget 1.9.14 ha770c72_1
    - bzip2 1.0.8 h7f98852_4
    - c-ares 1.19.1 hd590300_0
    - ca-certificates 2023.5.7 hbcca054_0
    - cairo 1.16.0 hbbf8b49_1016
    - curl 8.1.2 h409715c_0
    - expat 2.5.0 hcb278e6_1
    - font-ttf-dejavu-sans-mono 2.37 hab24e00_0
    - font-ttf-inconsolata 3.000 h77eed37_0
    - font-ttf-source-code-pro 2.038 h77eed37_0
    - font-ttf-ubuntu 0.83 hab24e00_0
    - fontconfig 2.14.2 h14ed4e7_0
    - fonts-conda-ecosystem 1 0
    - fonts-conda-forge 1 0
    - freetype 2.12.1 hca18f0e_1
    - fribidi 1.0.10 h36c2ea0_0
    - gcc_impl_linux-64 13.1.0 hc4be1a9_0
    - gettext 0.21.1 h27087fc_0
    - gfortran_impl_linux-64 13.1.0 hd511a9b_0
    - graphite2 1.3.13 h58526e2_1001
    - gsl 2.7 he838d99_0
    - gxx_impl_linux-64 13.1.0 hc4be1a9_0
    - harfbuzz 7.3.0 hdb3a94d_0
    - icu 72.1 hcb278e6_0
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - keyutils 1.6.1 h166bdaf_0
    - krb5 1.20.1 h81ceb04_0
    - ld_impl_linux-64 2.40 h41732ed_0
    - lerc 4.0.0 h27087fc_0
    - libblas 3.9.0 17_linux64_openblas
    - libcblas 3.9.0 17_linux64_openblas
    - libcurl 8.1.2 h409715c_0
    - libdeflate 1.18 h0b41bf4_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 h516909a_1
    - libexpat 2.5.0 hcb278e6_1
    - libffi 3.4.2 h7f98852_5
    - libgcc-devel_linux-64 13.1.0 he3cc6c4_0
    - libgcc-ng 13.1.0 he5830b7_0
    - libgfortran-ng 13.1.0 h69a702a_0
    - libgfortran5 13.1.0 h15d22d2_0
    - libglib 2.76.4 hebfc3b9_0
    - libgomp 13.1.0 he5830b7_0
    - libiconv 1.17 h166bdaf_0
    - libjpeg-turbo 2.1.5.1 h0b41bf4_0
    - liblapack 3.9.0 17_linux64_openblas
    - libnghttp2 1.52.0 h61bc06f_0
    - libopenblas 0.3.23 pthreads_h80387f5_0
    - libpng 1.6.39 h753d276_0
    - libsanitizer 13.1.0 hfd8a6a1_0
    - libssh2 1.11.0 h0841786_0
    - libstdcxx-devel_linux-64 13.1.0 he3cc6c4_0
    - libstdcxx-ng 13.1.0 hfd8a6a1_0
    - libtiff 4.5.1 h8b53f26_0
    - libuuid 2.38.1 h0b41bf4_0
    - libwebp-base 1.3.1 hd590300_0
    - libxcb 1.15 h0b41bf4_0
    - libxml2 2.11.4 h0d562d8_0
    - libzlib 1.2.13 hd590300_5
    - make 4.3 hd18ef5c_1
    - ncurses 6.4 hcb278e6_0
    - openssl 3.1.1 hd590300_1
    - pango 1.50.14 heaa33ce_1
    - pcre2 10.40 hc3806b6_0
    - pixman 0.40.0 h36c2ea0_0
    - pthread-stubs 0.4 h36c2ea0_1001
    - r-assertthat 0.2.1 r43hc72bb7e_4
    - r-base 4.3.0 hfabd6f2_1
    - r-bit 4.0.5 r43h57805ef_1
    - r-bit64 4.0.5 r43h57805ef_2
    - r-cli 3.6.1 r43ha503ecb_1
    - r-clipr 0.8.0 r43hc72bb7e_2
    - r-cpp11 0.4.4 r43hc72bb7e_0
    - r-crayon 1.5.2 r43hc72bb7e_2
    - r-curl 5.0.1 r43hf9611b0_0
    - r-data.table 1.14.8 r43h029312a_2
    - r-dplyr 1.1.2 r43ha503ecb_1
    - r-ellipsis 0.3.2 r43h57805ef_2
    - r-fansi 1.0.4 r43h57805ef_1
    - r-generics 0.1.3 r43hc72bb7e_2
    - r-glue 1.6.2 r43h57805ef_2
    - r-hms 1.1.3 r43hc72bb7e_1
    - r-lifecycle 1.0.3 r43hc72bb7e_2
    - r-magrittr 2.0.3 r43h57805ef_2
    - r-pillar 1.9.0 r43hc72bb7e_1
    - r-pkgconfig 2.0.3 r43hc72bb7e_3
    - r-prettyunits 1.1.1 r43hc72bb7e_3
    - r-progress 1.2.2 r43hc72bb7e_4
    - r-purrr 1.0.1 r43h57805ef_1
    - r-r.methodss3 1.8.2 r43hc72bb7e_2
    - r-r.oo 1.25.0 r43hc72bb7e_2
    - r-r.utils 2.12.2 r43hc72bb7e_1
    - r-r6 2.5.1 r43hc72bb7e_2
    - r-rcpp 1.0.10 r43ha503ecb_1
    - r-readr 2.1.4 r43ha503ecb_1
    - r-rlang 1.1.1 r43ha503ecb_1
    - r-stringi 1.7.12 r43hc0c3e09_2
    - r-stringr 1.5.0 r43h785f33e_1
    - r-tibble 3.2.1 r43h57805ef_2
    - r-tidyr 1.3.0 r43ha503ecb_1
    - r-tidyselect 1.2.0 r43hc72bb7e_1
    - r-tzdb 0.4.0 r43ha503ecb_1
    - r-utf8 1.2.3 r43h57805ef_1
    - r-vctrs 0.6.3 r43ha503ecb_0
    - r-vroom 1.6.3 r43ha503ecb_1
    - r-withr 2.5.0 r43hc72bb7e_2
    - r-xml2 1.3.5 r43h1ad5fc0_0
    - readline 8.2 h8228510_1
    - sed 4.8 he412f7d_0
    - sysroot_linux-64 2.12 he073ed8_15
    - tk 8.6.12 h27826a3_0
    - tktable 2.10 hb7b940f_3
    - xorg-kbproto 1.0.7 h7f98852_1002
    - xorg-libice 1.0.10 h7f98852_0
    - xorg-libsm 1.2.3 hd9c2040_1000
    - xorg-libx11 1.8.6 h8ee46fc_0
    - xorg-libxau 1.0.11 hd590300_0
    - xorg-libxdmcp 1.1.3 h7f98852_0
    - xorg-libxext 1.3.4 h0b41bf4_2
    - xorg-libxrender 0.9.11 hd590300_0
    - xorg-libxt 1.3.0 hd590300_0
    - xorg-renderproto 0.11.1 h7f98852_1002
    - xorg-xextproto 7.3.0 h0b41bf4_1003
    - xorg-xproto 7.0.31 h7f98852_1007
    - xz 5.2.6 h166bdaf_0
    - zlib 1.2.13 hd590300_5
    - zstd 1.5.2 hfc55251_7
  run:
    - bioconductor-biobase >=2.60.0,<2.61.0
    - bioconductor-limma >=3.56.0,<3.57.0
    - r-base >=4.3,<4.4.0a0
    - r-curl
    - r-data.table
    - r-dplyr
    - r-magrittr
    - r-r.utils
    - r-readr >=1.3.1
    - r-tidyr
    - r-xml2
test:
  commands:
    - $R -e "library('GEOquery')"
about:
  description: The NCBI Gene Expression Omnibus (GEO) is a public repository of microarray
    data.  Given the rich and varied nature of this resource, it is only natural to
    want to apply BioConductor tools to these data.  GEOquery is the bridge between
    GEO and BioConductor.
  home: https://bioconductor.org/packages/3.17/bioc/html/GEOquery.html
  license: MIT
  summary: Get data from NCBI Gene Expression Omnibus (GEO)
extra:
  container:
    extended-base: true
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:geoquery
