{% set version = "2.14.1" %}
{% set name = "GenomicScores" %}
{% set bioc = "3.18" %}

package:
  name: 'bioconductor-{{ name|lower }}'
  version: '{{ version }}'
source:
  url:
    - 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
    - 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/Archive/{{ name }}/{{ name }}_{{ version }}.tar.gz'
    - 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
    - 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
  md5: 3f3be6b84303478d0d061081b2dcf261
build:
  number: 0
  rpaths:
    - lib/R/lib/
    - lib/
  run_exports: '{{ pin_subpackage("bioconductor-genomicscores", max_pin="x.x") }}'
  noarch: generic
# Suggests: RUnit, BiocStyle, knitr, rmarkdown, BSgenome.Hsapiens.UCSC.hg19, phastCons100way.UCSC.hg19, MafDb.1Kgenomes.phase1.hs37d5, SNPlocs.Hsapiens.dbSNP144.GRCh37, VariantAnnotation, TxDb.Hsapiens.UCSC.hg19.knownGene, gwascat, RColorBrewer, shiny, shinyjs, shinycustomloader, data.table, DT, magrittr, shinydashboard
requirements:
  host:
    - 'bioconductor-annotationhub >=3.10.0,<3.11.0'
    - 'bioconductor-biobase >=2.62.0,<2.63.0'
    - 'bioconductor-biocfilecache >=2.10.0,<2.11.0'
    - 'bioconductor-biocgenerics >=0.48.0,<0.49.0'
    - 'bioconductor-biostrings >=2.70.0,<2.71.0'
    - 'bioconductor-delayedarray >=0.28.0,<0.29.0'
    - 'bioconductor-genomeinfodb >=1.38.0,<1.39.0'
    - 'bioconductor-genomicranges >=1.54.0,<1.55.0'
    - 'bioconductor-hdf5array >=1.30.0,<1.31.0'
    - 'bioconductor-iranges >=2.36.0,<2.37.0'
    - 'bioconductor-rhdf5 >=2.46.0,<2.47.0'
    - 'bioconductor-s4vectors >=0.40.0,<0.41.0'
    - r-base
    - r-biocmanager
    - r-httr
    - r-xml
  run:
    - 'bioconductor-annotationhub >=3.10.0,<3.11.0'
    - 'bioconductor-biobase >=2.62.0,<2.63.0'
    - 'bioconductor-biocfilecache >=2.10.0,<2.11.0'
    - 'bioconductor-biocgenerics >=0.48.0,<0.49.0'
    - 'bioconductor-biostrings >=2.70.0,<2.71.0'
    - 'bioconductor-delayedarray >=0.28.0,<0.29.0'
    - 'bioconductor-genomeinfodb >=1.38.0,<1.39.0'
    - 'bioconductor-genomicranges >=1.54.0,<1.55.0'
    - 'bioconductor-hdf5array >=1.30.0,<1.31.0'
    - 'bioconductor-iranges >=2.36.0,<2.37.0'
    - 'bioconductor-rhdf5 >=2.46.0,<2.47.0'
    - 'bioconductor-s4vectors >=0.40.0,<0.41.0'
    - r-base
    - r-biocmanager
    - r-httr
    - r-xml
test:
  commands:
    - '$R -e "library(''{{ name }}'')"'
about:
  home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
  license: Artistic-2.0
  summary: 'Infrastructure to work with genomewide position-specific scores'
  description: 'Provide infrastructure to store and access genomewide position-specific scores within R and Bioconductor.'
extra:
  parent_recipe:
    name: bioconductor-genomicscores
    path: recipes/bioconductor-genomicscores
    version: 1.4.1

