ProbeLevelSet-class     Class ProbeLevelSet
addSnpPdata             Add SNP data from hapmap-style data file to
                        pData of ExpressionSet
checkForFileInPath      Check For File In Path
doProbeLinear           Do Probe Linear
doProbeTTest            Do Probe T-Test
exampleProbeLevelSet    Example Dataset of class 'ProbeLevelSet'
excludeDoubleMatchingProbes
                        Exclude ProbeLevelSet probes that match more
                        than once in genome
exonStructure           Add exon-structure to plots
findProbePositions      Find positions of probes on a gene
findSequenceInGenome    Find a sequence in genome
geneRegionScan          Gene Region Scan
genomic                 genomic sequence of gene in ProbeLevelSet
getLocalMetaprobeIntensities
                        Get Metaprobe Intensities locally
getLocalProbeIntensities
                        Get Probe Intensities locally
getMetaprobesetsFromRegionOfInterest
                        Get Meta Probe Set IDs From Region Of Interest
getProbeLevelAnnotationForExonArrays
                        Get ProbeLevel Annotation for Exon Arrays
getProbesetsFromMetaprobeset
                        Get Probeset IDs From metaprobeset IDs
getProbesetsFromRegionOfInterest
                        Get Probeset IDs From Region Of Interest
getSequence             Get Sequence from a ProbeLevelSet
getServerProbeIntensities
                        Get Probe Intensities from a server
mrna                    mRNA sequence of gene in ProbeLevelSet
plotCoexpression        Plot Coexpression of probes in a ProbeLevelSet
plotOnGene              Plot probe level data on a gene
plotStatistics          Plot Statistics
readGeneInput           Standardize reading of gene inputs
translateSampleNames    Translate sample names using translation file
