gCrisprTools-package	gCrisprTools-package
aln	aln
ann	ann
appendDateAndExt	appendDateAndExt
ct.alignmentChart	ct.alignmentChart
ct.alphaBeta	ct.alphaBeta
ct.applyAlpha	ct.applyAlpha
ct.buildSE	ct.buildSE
ct.CAT	ct.CAT
ct.DirectionalTests	ct.DirectionalTests
ct.drawColorLegend	ct.drawColorLegend
ct.drawFlat	ct.drawFlat
ct.ecdf	ct.ecdf
ct.exprsColor	ct.exprsColor
ct.filterReads	ct.filterReads
ct.GCbias	ct.GCbias
ct.generateResults	ct.generateResults
ct.getPanther	ct.getPanther
ct.GREATdb	ct.GREATdb
ct.gRNARankByReplicate	ct.gRNARankByReplicate
ct.guideCDF	ct.guideCDF
ct.inputCheck	ct.inputCheck
ct.makeContrastReport	ct.makeContrastReport
ct.makeQCReport	ct.makeQCReport
ct.makeReport	ct.makeReport
ct.makeRhoNull	ct.makeRhoNull
ct.multiGSEA	ct.multiGSEA
ct.normalizeBySlope	ct.normalizeBySlope
ct.normalizeFactoredQuantiles	ct.normalizeFactoredQuantiles
ct.normalizeFQ	ct.normalizeFQ
ct.normalizeGuides	ct.normalizeGuides
ct.normalizeMedians	ct.normalizeMedians
ct.normalizeNTC	ct.normalizeNTC
ct.normalizeSpline	ct.normalizeSpline
ct.numcores	ct.numcores
ct.PantherPathwayEnrichment	ct.PantherPathwayEnrichment
ct.PRC	ct.PRC
ct.prepareAnnotation	ct.prepareAnnotation
ct.preprocessFit	ct.preprocessFit
ct.rawCountDensities	ct.rawCountDensities
ct.resultCheck	ct.resultCheck
ct.ROC	ct.ROC
ct.RRAalpha	ct.RRAalpha
ct.RRAalphaBatch	ct.RRAalphaBatch
ct.RRAaPvals	ct.RRAaPvals
ct.signalSummary	ct.signalSummary
ct.stackGuides	ct.stackGuides
ct.targetSetEnrichment	ct.targetSetEnrichment
ct.topTargets	ct.topTargets
ct.viewControls	ct.viewControls
ct.viewGuides	ct.viewGuides
dir.writable	dir.writable
es	es
essential.genes	essential.genes
fit	fit
initOutDir	initOutDir
renderReport	renderReport
resultsDF	resultsDF
