# This file created by conda-build 3.18.9
# meta.yaml template originally from:
# /opt/recipe, last modified Sat Nov  2 07:34:26 2019
# ------------------------------------------------

package:
    name: bioconductor-gage
    version: 2.36.0
source:
    md5: 5e81b50bc80e002eb0070c620d5299d6
    url:
        - https://bioarchive.galaxyproject.org/gage_2.36.0.tar.gz
        - https://bioconductor.org/packages/3.10/bioc/src/contrib/gage_2.36.0.tar.gz
        - https://depot.galaxyproject.org/software/bioconductor-gage/bioconductor-gage_2.36.0_src_all.tar.gz
build:
    noarch: generic
    number: '0'
    rpaths:
        - lib/
        - lib/R/lib/
    string: r36_0
requirements:
    host:
        - _libgcc_mutex 0.1 main
        - _r-mutex 1.0.1 anacondar_1
        - binutils_impl_linux-64 2.31.1 h7fc9f1b_2
        - binutils_linux-64 2.31.1 h6176602_12
        - bioconductor-annotationdbi 1.48.0 r36_0
        - bioconductor-biobase 2.46.0 r36h516909a_0
        - bioconductor-biocgenerics 0.32.0 r36_0
        - bioconductor-biostrings 2.54.0 r36h516909a_0
        - bioconductor-graph 1.64.0 r36h516909a_0
        - bioconductor-iranges 2.20.0 r36h516909a_0
        - bioconductor-keggrest 1.26.0 r36_0
        - bioconductor-s4vectors 0.24.0 r36h516909a_0
        - bioconductor-xvector 0.26.0 r36h516909a_0
        - bioconductor-zlibbioc 1.32.0 r36h516909a_0
        - bwidget 1.9.13 0
        - bzip2 1.0.8 h516909a_1
        - ca-certificates 2019.9.11 hecc5488_0
        - cairo 1.16.0 hfb77d84_1002
        - curl 7.65.3 hf8cf82a_0
        - fontconfig 2.13.1 h86ecdb6_1001
        - freetype 2.10.0 he983fc9_1
        - fribidi 1.0.5 h516909a_1002
        - gcc_impl_linux-64 7.3.0 habb00fd_2
        - gcc_linux-64 7.3.0 h553295d_12
        - gettext 0.19.8.1 hc5be6a0_1002
        - gfortran_impl_linux-64 7.3.0 hdf63c60_2
        - gfortran_linux-64 7.3.0 h553295d_12
        - glib 2.58.3 h6f030ca_1002
        - graphite2 1.3.13 hf484d3e_1000
        - gsl 2.5 h294904e_1
        - gxx_impl_linux-64 7.3.0 hdf63c60_2
        - gxx_linux-64 7.3.0 h553295d_12
        - harfbuzz 2.4.0 h9f30f68_3
        - icu 64.2 he1b5a44_1
        - jpeg 9c h14c3975_1001
        - krb5 1.16.3 h05b26f9_1001
        - libblas 3.8.0 14_openblas
        - libcblas 3.8.0 14_openblas
        - libcurl 7.65.3 hda55be3_0
        - libedit 3.1.20170329 hf8c457e_1001
        - libffi 3.2.1 he1b5a44_1006
        - libgcc-ng 9.1.0 hdf63c60_0
        - libgfortran-ng 7.3.0 hdf63c60_2
        - libiconv 1.15 h516909a_1005
        - liblapack 3.8.0 14_openblas
        - libopenblas 0.3.7 h6e990d7_2
        - libpng 1.6.37 hed695b0_0
        - libssh2 1.8.2 h22169c7_2
        - libstdcxx-ng 9.1.0 hdf63c60_0
        - libtiff 4.0.10 hfc65ed5_1004
        - libuuid 2.32.1 h14c3975_1000
        - libxcb 1.13 h14c3975_1002
        - libxml2 2.9.10 hee79883_0
        - lz4-c 1.8.3 he1b5a44_1001
        - make 4.2.1 h14c3975_2004
        - ncurses 6.1 hf484d3e_1002
        - openssl 1.1.1c h516909a_0
        - pango 1.42.4 ha030887_1
        - pcre 8.43 he1b5a44_0
        - pixman 0.38.0 h516909a_1003
        - pthread-stubs 0.4 h14c3975_1001
        - r-askpass 1.1 r36hcdcec82_1
        - r-assertthat 0.2.1 r36h6115d3f_1
        - r-backports 1.1.5 r36hcdcec82_0
        - r-base 3.6.1 hba50c9b_5
        - r-bit 1.1_14 r36hcdcec82_1
        - r-bit64 0.9_7 r36hcdcec82_1001
        - r-blob 1.2.0 r36_1
        - r-curl 4.2 r36hcdcec82_0
        - r-dbi 1.0.0 r36h6115d3f_1002
        - r-digest 0.6.22 r36h0357c0b_0
        - r-ellipsis 0.3.0 r36hcdcec82_0
        - r-glue 1.3.1 r36hcdcec82_1
        - r-httr 1.4.1 r36h6115d3f_1
        - r-jsonlite 1.6 r36hcdcec82_1001
        - r-magrittr 1.5 r36h6115d3f_1002
        - r-memoise 1.1.0 r36h6115d3f_1003
        - r-mime 0.7 r36hcdcec82_1
        - r-openssl 1.4.1 r36h9c8475f_0
        - r-pkgconfig 2.0.3 r36h6115d3f_0
        - r-plogr 0.2.0 r36h6115d3f_1002
        - r-png 0.1_7 r36hcdcec82_1003
        - r-prettyunits 1.0.2 r36h6115d3f_1002
        - r-r6 2.4.0 r36h6115d3f_2
        - r-rcpp 1.0.2 r36h0357c0b_0
        - r-rlang 0.4.1 r36hcdcec82_0
        - r-rsqlite 2.1.2 r36h0357c0b_1
        - r-sys 3.3 r36hcdcec82_0
        - r-vctrs 0.2.0 r36hcdcec82_1
        - r-zeallot 0.1.0 r36h6115d3f_1001
        - readline 8.0 hf8c457e_0
        - sed 4.7 h1bed415_1000
        - tk 8.6.9 hed695b0_1003
        - tktable 2.10 h555a92e_3
        - xorg-kbproto 1.0.7 h14c3975_1002
        - xorg-libice 1.0.10 h516909a_0
        - xorg-libsm 1.2.3 h84519dc_1000
        - xorg-libx11 1.6.9 h516909a_0
        - xorg-libxau 1.0.9 h14c3975_0
        - xorg-libxdmcp 1.1.3 h516909a_0
        - xorg-libxext 1.3.4 h516909a_0
        - xorg-libxrender 0.9.10 h516909a_1002
        - xorg-renderproto 0.11.1 h14c3975_1002
        - xorg-xextproto 7.3.0 h14c3975_1002
        - xorg-xproto 7.0.31 h14c3975_1007
        - xz 5.2.4 h14c3975_1001
        - zlib 1.2.11 h516909a_1006
        - zstd 1.4.3 h3b9ef0a_0
    run:
        - bioconductor-annotationdbi >=1.48.0,<1.49.0
        - bioconductor-graph >=1.64.0,<1.65.0
        - bioconductor-keggrest >=1.26.0,<1.27.0
        - r-base >=3.6,<3.7.0a0
test:
    commands:
        - $R -e "library('gage')"
about:
    description: GAGE is a published method for gene set (enrichment or GSEA) or pathway
        analysis. GAGE is generally applicable independent of microarray or RNA-Seq
        data attributes including sample sizes, experimental designs, assay platforms,
        and other types of heterogeneity, and consistently achieves superior performance
        over other frequently used methods. In gage package, we provide functions
        for basic GAGE analysis, result processing and presentation. We have also
        built pipeline routines for of multiple GAGE analyses in a batch, comparison
        between parallel analyses, and combined analysis of heterogeneous data from
        different sources/studies. In addition, we provide demo microarray data and
        commonly used gene set data based on KEGG pathways and GO terms. These funtions
        and data are also useful for gene set analysis using other methods.
    home: https://bioconductor.org/packages/3.10/bioc/html/gage.html
    license: GPL (>=2.0)
    license_file: /opt/conda/conda-bld/bioconductor-gage_1572693163487/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_place/lib/R/share/licenses/GPL-3
    summary: Generally Applicable Gene-set Enrichment for Pathway Analysis
extra:
    copy_test_source_files: true
    final: true
    identifiers:
        - biotools:gage
