\name{fastreeRNews}
\title{fastreeR News}
\encoding{UTF-8}

\section{Version 1.5.2 (2023-08-24)}{\itemize{
\item Update java backend to BioInfoJavaUtils-1.4.0 (haploid GT in vcf).
}}

\section{Version 1.5.1 (2023-04-30)}{\itemize{
\item Update java backend to BioInfoJavaUtils-1.3.1 (fasta header name).
}}

\section{Version 1.5.0 (2023-04-27)}{\itemize{
\item Bump x.y.z version to odd y following creation of RELEASE_3_17 branch.
}}

\section{Version 1.4.0 (2023-04-21)}{\itemize{
\item Bump x.y.z version to even y prior to creation of RELEASE_3_17 branch.
}}

\section{Version 1.3.0 (2022-11-01)}{\itemize{
\item Bump x.y.z version to odd y following creation of RELEASE_3_16 branch.
}}

\section{Version 1.2.0 (2022-11-01)}{\itemize{
\item Bump x.y.z version to even y prior to creation of RELEASE_3_16 branch.
}}

\section{Version 1.1.6 (2022-09-26)}{\itemize{
\item Update java backend to BioInfoJavaUtils-1.2.4 (revamped FastaManager).
}}

\section{Version 1.1.5 (2022-06-23)}{\itemize{
\item Update vignette minor bug.
}}

\section{Version 1.1.4 (2022-06-16)}{\itemize{
\item Update vignette to handle getting sample files through https failure.
}}

\section{Version 1.1.3 (2022-06-06)}{\itemize{
\item Update vignette to handle getting sample files through https failure.
}}

\section{Version 1.1.2 (2022-05-15)}{\itemize{
\item Update possibly corrupted samples.vcf.gz.
}}

\section{Version 1.1.1 (2022-05-08)}{\itemize{
\item Update tests to improve coverage.
}}

\section{Version 1.1.0 (2022-05-08)}{\itemize{
\item Bump x.y.z version to odd y following creation of RELEASE_3_15 branch.
}}

\section{Version 1.0.0 (2022-04-27)}{\itemize{
\item Bioconductor 3.15 Release.
New package \pkg{fastreeR}, Phylogenetic, Distance
and Other Calculations on VCF and Fasta Files.
}}

\section{Version 0.99.7 (2022-04-02)}{\itemize{
\item Updates and corrections after the 1st Bioconductor review.
}}

\section{Version 0.99.6 (2022-03-26)}{\itemize{
\item Drop function \code{dist2hist}.
}}

\section{Version 0.99.5 (2022-03-25)}{\itemize{
\item Update vignette's use of \code{dist2hist}.
}}

\section{Version 0.99.4 (2022-03-25)}{\itemize{
\item Update java backend (createHistogram).
}}

\section{Version 0.99.3 (2022-03-25)}{\itemize{
\item Update java backend.
}}

\section{Version 0.99.2 (2022-03-25)}{\itemize{
\item Update \code{README.md} to inform about JDK>=8 requirement.
\item Update java dependencies (jfreechart-1.5.3).
}}

\section{Version 0.99.1 (2022-03-24)}{\itemize{
\item Update vignette to use \code{BiocFileCache}
so that sample vcf and fasta downloads not get repeated needlessly.
}}

\section{Version 0.99.0 (2022-03-21)}{\itemize{
\item Submitted to Bioconductor.
}}
