# An effective identification of alternative splicing events using junction arrays and RNA-Seq data

## Documentation for package ‘EventPointer’ version 2.0.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

AllEvents_RNASeq | Alternative splicing events detected by EventPointer
AllEvents_RNASeq_MP | Alternative splicing multi-path events detected by EventPointer
ArrayDatamultipath | Preprocessed arrays data with multi-path events
ArraysData | Preprocessed arrays data
CDFfromGTF | CDF file creation for EventPointer
CDFfromGTF_Multipath | CDF file creation for EventPointer
EventDetection | Detect splicing events using EventPointer methodology
EventDetectionMultipath | Detect splicing events using EventPointer methodology
EventPointer | EventPointer
EventPointer_IGV | EventPointer IGV Visualization
EventPointer_RNASeq | Statistical analysis of alternative splcing events for RNASeq data
EventPointer_RNASeq_IGV | EventPointer RNASeq IGV Visualization
EventPointer_RNASeq_TranRef | Statistical analysis with the output of GetPSI_FromTranRef
EventsGTFfromTrancriptomeGTF | Events .gtf from trancriptome .gtf
EventXtrans | relationship between isoforms and events
getbootstrapkallisto | Author: JF
GetPSI_FromTranRef | GetPSI_FromTranRef
PrepareBam_EP | Bam files preparation for EventPointer
PSIss | relationship between isoforms and events
PSI_Statistic | PSI_Statistic
SG_RNASeq | Splicing graph elements predicted from BAM files